Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02484 ATGGCGTCGGTCCCCAGCACCGTCGCTCCCCGCACCTTCCTGCCGTCGATTCCCAAGCCGAGAGCTCCTCTTCACGCCGCGAAATCCGTCGCCAGCGCCGCGCGCAACTTCCCGAGACTTTCGCACAACCTCATTCTCTCCGGAAACAAACGCGCGGTGGCGGTGAACTCGGCGTCGGAGGAGTTCGACGTGATATCGGTGCAGAGCGAGGACATTACCGACCAGCAGGAGGGCGTCGTGGTGAGCCGCGTCGAGATGGAAGGTGGAGACGGCGAATTGGCGACGCAGGTGAGCCGATTCGGCGCGAACGAGGGTTTGCTGTCGTTGGAAGGGTTTTCTTCTTCGTCTTCGCCGTCGTCTTCGTCTCTGATCGGGAGTGAGAGCGTGGACATGGAGAAGCTAATTGATAGAACTATCAATGCTACGATTGTGCTCGCAGCTGGCACTTTCGCCGTCACCAAACTTCTCACCATTGATAGTGATTACTGGCACGGATGGACGCTATATGAGATACTAAGATATGCACCTCAGCATAACTGGTCTGCTTACGAGGAAGCTCTTAAGACAAATCCTGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCCTTAGGGGACTGGATTGCGCAGTGCGTTGAAGGAAAACCTCTGTTTGAGTTTGACCGTGCGCGGATGTTCAGATCAGGGCTTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTTCTATTATCAGTTTTGCGAGGAGCTATTTCCTTACAAAGAATGGTGGGTAGTACCTGCCAAAGTTGCCTTCGATCAAACTGCATGGTCTGCACTTTGGAACAGCATATATTATACTGTTGTTGCATTACTGCGTCTTGATCCTCCTATGAGTATTTTAAATGAATTGAAGGCAACGTTTTTCCCCATGTTGACGGCCGGATGGAAGCTATGGCCATTTGCCCATCTCATTACTTATGGTGTGATACCGGTTGAACAAAGACTCCTCTGGGTGGATACCATTGAGCTTATTTGGGTGACCATACTTTCCACATTTTCAAATGAAAAATCAGAAGCAAGAAACTCTCAGTCTATGGTGCCTTCAGAGGTGAAATCCACCACATATGTTCATCCTCCTGAGGAGTAA 1131 0.4996 MASVPSTVAPRTFLPSIPKPRAPLHAAKSVASAARNFPRLSHNLILSGNKRAVAVNSASEEFDVISVQSEDITDQQEGVVVSRVEMEGGDGELATQVSRFGANEGLLSLEGFSSSSSPSSSSLIGSESVDMEKLIDRTINATIVLAAGTFAVTKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSLGDWIAQCVEGKPLFEFDRARMFRSGLVGFTLHGSLSHFYYQFCEELFPYKEWWVVPAKVAFDQTAWSALWNSIYYTVVALLRLDPPMSILNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTIELIWVTILSTFSNEKSEARNSQSMVPSEVKSTTYVHPPEE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02484 376 Pfam Mpv17 / PMP22 family 290 345 IPR007248 GO:0016021
Gma13g02484 376 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 90 367 IPR007248 GO:0016021
Gma13g02484 376 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 90 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02484 Gma-Chr13 39682829 39686698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02484 183 351 Miscellaneous Gene Families AT2G14860 25.444 9.00e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02484 K13348 - gmx:100786706 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02484 13 39682829 39686698 Gma13g02484 13 39682829 39686698 ECH
Gma13g02484 13 39682829 39686698 Gma12g02078 12 41499580 41501919 GST