Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02078 ATGGCGTCGGTCCACAGCACCGTCGCTCCCCGTACCTTCCTGCCGTCAATTCCCAAGCCGAGAGCTCCTCTTCACGCCGCAAAGTTCGTCGCCGGCGGCGCGCACAACTTTCGGAGACTGTCGCGCAACCTCATTCTCTCCGGAAACAAACGCGCGGTGGCGGCGAACTCGGCTGCGGAGGAGTTCGACGTGATATCGGTGCAGAGCGACGACATCACCGACCAGCAGGAGGGCGTGGTGGTGAGCCGCGTCGAGATGGAAGGCGGAGACTGCGAATTGGCGACGCAGGTGAGCGGATTCGGAGCCAACGAGGGCTTGCTGTCGTTGGAAGGGTTTTCTTCATCTTCGTCGTCGTCTTCGTCTCTGGTCGGGAATGAGAGCGAGGAGGACATGGAGAAGCTAATTGATAGAACTATCAATGCTACGATTGTGCTCGCCGCTGGCACTTTCGCCGTCACCAAACTTCTCACGATTGATAGCGATTACTGGCATGGATGGACGCTATACGAGATACTAAGATATGCGCCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCAGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCTATAGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTGTTTGAGTTTGACCGTGCACGGATGTTCAGATCGGGGCTTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTTCTATTATCAGTTTTGCGAGGAGCTATTTCCTTACAAAGAATGGTGGGTAGTTCCTGCCAAAGTTGCCTTCGATCAAACTGCATGGTCAGCACTTTGGAACAGCATATATTATACGGTTGTTGCACTACTGCGTCGTGATCCTCCTATGAGTATTTTAAATGAATTGAAGGCGACGTTTTTTCCCATGCTAACGGCAGGATGGAAGCTATGGCCATTTGCCCATCTCATTACTTATGGTGTGATACCGGTTGAGCAAAGACTTCTCTGGGTGGATACCATAGAGCTTATTTGGGTGACCATACTTTCCACATTTTCAAATGAAAAATCAGAAGCAAGAAACTCTCAGTCTATGGTGCCTTCAGAAGTGAAATCCACATCTGTTTATCCTCCTGAGGAGTAA 1128 0.4982 MASVHSTVAPRTFLPSIPKPRAPLHAAKFVAGGAHNFRRLSRNLILSGNKRAVAANSAAEEFDVISVQSDDITDQQEGVVVSRVEMEGGDCELATQVSGFGANEGLLSLEGFSSSSSSSSSLVGNESEEDMEKLIDRTINATIVLAAGTFAVTKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSIGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHFYYQFCEELFPYKEWWVVPAKVAFDQTAWSALWNSIYYTVVALLRRDPPMSILNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTIELIWVTILSTFSNEKSEARNSQSMVPSEVKSTSVYPPEE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02078 375 MobiDBLite consensus disorder prediction 355 375 - -
Gma12g02078 375 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 90 369 IPR007248 GO:0016021
Gma12g02078 375 Pfam Mpv17 / PMP22 family 285 345 IPR007248 GO:0016021
Gma12g02078 375 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 90 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02078 Gma-Chr12 41499580 41501919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02078 183 351 Miscellaneous Gene Families AT2G14860 25.444 1.18e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02078 K13348 - gmx:100805057 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02078 12 41499580 41501919 Gma12g02078 12 41499580 41501919 ECH
Gma13g02484 13 39682829 39686698 Gma12g02078 12 41499580 41501919 GST