Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01474 ATGAAATTCGGAAAGAGCCTGAGCAGCCAGATCGAGAAAACCCTGCCGGAGTGGCGTGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAGCTCAAGCAATTCGACCCTCCCGCCGCCGCCGATGAGCGCCCCGGCAAACGCCTCAAGTCCGACGCCGTTCCCGACGCCGCCGACATGTCGAAGGAGGAGAGCGACTTCCGGAACCTGCTGGAGAATGAACTCGACAAATTCAACACCTTCTTCGTCGAGAAGGAGGAAGAGTACATTATCAGACTCAAGGAGTTACAAGATAGGGTTGCCAAAGTTAAGGATTCAAGTGAAGAGATGATGAAAATCCACAAGGAAATTGTGGACTTCCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTTAACTATACAGGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTATCACTGACTTGCTCTACAAGCTTGTAAAAGAGTGTGAAACAATGCTGGACCGCCTTTTCCCTGTGAATGATCCTGCTCCAGTTTCCAGTGAGACAACTCCCCAAGCTGAAGGTTTTGATCCTTCAACTTCAACCACTACCAAGAGTGATGGTTTGCTGATTCCCAAGGAATTAGCTGAGATTGAGTACATGGAGAGCCTTTATATGAAGAGTACTGTATCAGCTTTGCATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACAGTTAGCATGTTTTCATTGCCACCGTTGAAAATAAGTGGTTCAGAAGAAACATGGAAGAAAATCCCGGTTCTGGAACAAACAGCCAAAGCAGACGCCAAGCTGCACTCAGAAGGTGGCGTTATAGAAAAATTCAATGGTAGTAGTGGTCGGCTGAATGGTGCCAAGTACTTGCTTGTCTCATCATCCTCAGACACAAGAGTTGAAACGCAATACACAAGGATAGATCCTGGTGCTTTACTTGTTCCAAAAACTTTCTGGATTTCCCCTTCTGGTAAATTTGCATTTGGTTTATATCCGCAAGGGCTAGGCAATGTCTTTGTGGTTGCAATTTGGTTGGTTAGAGGGGAGAGCAGGACAGTGGTATGGACTGCAAGGCGAGATGATCCTCCGGTCACCTCAAATGCAAAGATACAACTAACCATGAATGGTAAGCTCGTGCTAATAGATGGCCAAGGAAAAGAGAAGCTTATTGCAGATTTTATTGCAAAAGCTTCCTTCGCCTCCATCTTTGATTCTGGAAACTTTGCACTATGCGACAATAATTCCAACACATATGGCAGAGTTTCAATCACCCAACTGACACTTTGTTAA 1356 0.4535 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKQFDPPAAADERPGKRLKSDAVPDAADMSKEESDFRNLLENELDKFNTFFVEKEEEYIIRLKELQDRVAKVKDSSEEMMKIHKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFITDLLYKLVKECETMLDRLFPVNDPAPVSSETTPQAEGFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTVSALHVLQEIRSGSSTVSMFSLPPLKISGSEETWKKIPVLEQTAKADAKLHSEGGVIEKFNGSSGRLNGAKYLLVSSSSDTRVETQYTRIDPGALLVPKTFWISPSGKFAFGLYPQGLGNVFVVAIWLVRGESRTVVWTARRDDPPVTSNAKIQLTMNGKLVLIDGQGKEKLIADFIAKASFASIFDSGNFALCDNNSNTYGRVSITQLTLC 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01474 451 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 284 IPR031142 GO:0016036
Gma13g01474 451 MobiDBLite consensus disorder prediction 193 214 - -
Gma13g01474 451 ProSiteProfiles SPX domain profile. 1 159 IPR004331 -
Gma13g01474 451 MobiDBLite consensus disorder prediction 190 214 - -
Gma13g01474 451 Coils Coil 86 113 - -
Gma13g01474 451 Pfam SPX domain 112 161 IPR004331 -
Gma13g01474 451 Pfam SPX domain 1 35 IPR004331 -
Gma13g01474 451 MobiDBLite consensus disorder prediction 34 61 - -
Gma13g01474 451 SUPERFAMILY alpha-D-mannose-specific plant lectins 360 439 IPR036426 -
Gma13g01474 451 CDD SPX_AtSPX1_like 2 148 - -
Gma13g01474 451 ProSiteProfiles Bulb-type lectin domain profile. 326 445 IPR001480 -
Gma13g01474 451 Gene3D - 320 442 IPR036426 -
Gma13g01474 451 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01474 Gma-Chr13 29464842 29469096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01474 - - gmx:100787780 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01474 13 29464842 29469096 Gma13g01474 13 29464842 29469096 ECH
Gma17g01077 17 9257233 9259787 Gma13g01474 13 29464842 29469096 GST
Gma13g01474 13 29464842 29469096 Gma04g01396 04 31632188 31635141 PCT
Gma04g01396 04 31632188 31635141 Gma13g01474 13 29464842 29469096 PCT