Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01396 ATGAAATTCGGAAAGAGCCTGAGCAACCAGATCGAGAAAACGCTGCCCCAATGGCGTGACAAGTTCCTGTCCTACAAGGAGCTGAAGAAGAAGTTGAAGCTCGTGGAGCCCAAACCCATTAATGGCGTGGAAGAACGCCCCACCAAACGCGCAAGGCACGAGGGAGACATCATCATCATGTCCAAGGAGGAAACTGACTTCAGGAACTCCATCGAACAAGAACTCCACAAATTCAACACCTTCTTTGTCGAGAAAGAGGAAGAATGCATCATCAAATTGAAGGAGCTACAGGATAGGGTTGCCAAAGTAAAAAATTCTAATGAGCAATTGATGCAAATTCGCAAGGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTCGAAAACTATAGTGCCCTTAACTACATAGGATTAGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCCTTTCATTCAGAAGGTCTTGCAACAGCCTTTCTTCACCACTGACCTTCTATACAAGCTTGTGAAGGAGTGTGAAACAATGCTTAACCACCTTTTCCCGGTGAACGATCCTTCGACTTCTGGCGAGGCACCTCCCCAAGCTGAGGAGGGATGTGATGCTTCAACTTCAACCAGCACAAAGAGTAGTGATGATCTGCTGATGCCTAAGGAGTTAGCAGCAGCCAACCATCACATTGAGAGCCTTTATATGAAGAGTACCATTTCAGCTTTGCATGTTTTGCAGGAAATTCGAAAGGGAAGCTCAACAGTTAGCATGTTTTCATTGCCACCATTGCAGATAAGTGGCTTGGAAGAAACATGGAACAAAATCCCTATTCTGGAACAAACAGCCAAGTAA 861 0.4472 MKFGKSLSNQIEKTLPQWRDKFLSYKELKKKLKLVEPKPINGVEERPTKRARHEGDIIIMSKEETDFRNSIEQELHKFNTFFVEKEEECIIKLKELQDRVAKVKNSNEQLMQIRKEIVDFHGEMVLLENYSALNYIGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLNHLFPVNDPSTSGEAPPQAEEGCDASTSTSTKSSDDLLMPKELAAANHHIESLYMKSTISALHVLQEIRKGSSTVSMFSLPPLQISGLEETWNKIPILEQTAK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01396 286 Pfam SPX domain 1 36 IPR004331 -
Gma04g01396 286 Pfam SPX domain 109 161 IPR004331 -
Gma04g01396 286 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 286 - -
Gma04g01396 286 Coils Coil 93 113 - -
Gma04g01396 286 MobiDBLite consensus disorder prediction 190 220 - -
Gma04g01396 286 ProSiteProfiles SPX domain profile. 1 159 IPR004331 -
Gma04g01396 286 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 286 IPR031142 GO:0016036
Gma04g01396 286 CDD SPX_AtSPX1_like 2 148 - -
Gma04g01396 286 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01396 Gma-Chr4 31632188 31635141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01396 - - gmx:100790400 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01077 17 9257233 9259787 Gma04g01396 04 31632188 31635141 PCT
Gma13g01474 13 29464842 29469096 Gma04g01396 04 31632188 31635141 PCT
Gma04g01396 04 31632188 31635141 Gma17g01077 17 9257233 9259787 PCT
Gma04g01396 04 31632188 31635141 Gma13g01474 13 29464842 29469096 PCT