Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01281 ATGGCGTCCAAGAAACAAGAGGAGCGAGCTGAGGCAGCTGCGAAAGTTGCTGCCAAAGAACTCGAACAAGTCAACAGAGAAAGAAGAGACCGTGATTTCGGTGTTGTTGCTGAACAACAACAACAACATCATCAGGAAGATCAACAAAAACGTGGTGTAATCGGGTCCATGTTTAAGGCGGTGCAAGACACCTACGAGAACGCCAAGGAAGCTGTCGTTGGCAAGAAAGAAGCTACTAATAACGCGTACAGTAATACAGAGGTTATTCACGATGTTAACATTCAGCCCGATGACGTGTCGGCAACGGGGGAAGTAAGGGACATATCAGCCACAAAGACTCATGATATCTACGATTCTGCCACGGACAACAACAACAACAAAACCGGTTCCAAGGTCGGAGAGTACGCAGATTACGCTTCTCAGAAGGCCAAGGAAACAAAAGATGCAACGATGGAAAAAGCTGGAGAGTACACAGATTATGCTTCGCAGAAAGCGAAGGAAGCGAAGAAGACGACCATGGAGAAGGGTGGAGAATACAAGGATTACTctgcggagaaagctaaggagagaaaagatgctactgtgaataagatgggagagtataaggactatgctgcggagaaagccaaagaggggaaagatgctactgtgaataaaatgggagagtataaggactatgctgcggagaaaacgaaagaggggaaagatgccactgtgaataagatgggagagtataaggattacactgcggagaaggcgaaagaggggaaagatACGACGTTGGGGAAGCTTGGGGAGCTGAAGGACACGGCTTCGGATGCGGCGAAGAGGGCCGTGGGTTACTTGAGCGGCAAGAAAGAGGAAACTAAAGAGATGGCTTCGGAGACCGCCGAGGCGACGGCGAATAAGGCAGGGGAGATGAAGGAGGCAACAAAGAAAAAGACGGCGGAGACCGCGGAGGCGGCGAAGAATAAGGCGGGGGAGATCAAGGACAGAGCCGCGGAGACGGCGGAGGCCGCGAAAAACAAGACCGCGGAGACCGCGGAAGTGACGAAGAATAAGGCTTTGGAGATGAAGGATGCAGCGAAGGACAGGACCGCTGAGACAACGGATGCGGCGAAGCAGAAAACTGCACAGGCAAAGGAGAACACCAAGGAAAATGTGAGTGGTGCAGGTGAAACTGCAAGGAGGAAAATGGAAGAGCCAAAGCTTCAAGGTAAAGAAGGGTATGGGGGCCGTGGAGACAAGGTGGTGGTGAAAGTGGAAGAGAGTCGACCAGGGGCAATTGCGGAAACGCTGAAAGCCGCCGACCAGATTGCGGGACAGACCTTCAACGATGTAGGACGCTTCGATGAAGAGGGTGTCGTCAATGTGGAGCGCCGCAAGAAATAA 1392 0.4346 MASKKQEERAEAAAKVAAKELEQVNRERRDRDFGVVAEQQQQHHQEDQQKRGVIGSMFKAVQDTYENAKEAVVGKKEATNNAYSNTEVIHDVNIQPDDVSATGEVRDISATKTHDIYDSATDNNNNKTGSKVGEYADYASQKAKETKDATMEKAGEYTDYASQKAKEAKKTTMEKGGEYKDYSAEKAKERKDATVNKMGEYKDYAAEKAKEGKDATVNKMGEYKDYAAEKTKEGKDATVNKMGEYKDYTAEKAKEGKDTTLGKLGELKDTASDAAKRAVGYLSGKKEETKEMASETAEATANKAGEMKEATKKKTAETAEAAKNKAGEIKDRAAETAEAAKNKTAETAEVTKNKALEMKDAAKDRTAETTDAAKQKTAQAKENTKENVSGAGETARRKMEEPKLQGKEGYGGRGDKVVVKVEESRPGAIAETLKAADQIAGQTFNDVGRFDEEGVVNVERRKK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01281 463 MobiDBLite consensus disorder prediction 286 418 - -
Gma13g01281 463 MobiDBLite consensus disorder prediction 21 50 - -
Gma13g01281 463 Gene3D - 248 301 - -
Gma13g01281 463 Gene3D - 155 203 - -
Gma13g01281 463 Gene3D - 204 247 - -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 127 157 IPR004238 -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 224 267 IPR004238 -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 184 223 IPR004238 -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 297 340 IPR004238 -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 348 390 IPR004238 -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 158 201 IPR004238 -
Gma13g01281 463 Pfam Late embryogenesis abundant protein 202 245 IPR004238 -
Gma13g01281 463 MobiDBLite consensus disorder prediction 345 371 - -
Gma13g01281 463 MobiDBLite consensus disorder prediction 372 390 - -
Gma13g01281 463 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 380 463 - -
Gma13g01281 463 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 1 324 - -
Gma13g01281 463 MobiDBLite consensus disorder prediction 21 53 - -
Gma13g01281 463 PANTHER DAUER UP-REGULATED-RELATED 1 324 - -
Gma13g01281 463 PANTHER DAUER UP-REGULATED-RELATED 380 463 - -
Gma13g01281 463 MobiDBLite consensus disorder prediction 305 339 - -
Gma13g01281 463 MobiDBLite consensus disorder prediction 391 418 - -
Gma13g01281 463 Coils Coil 2 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01281 Gma-Chr13 27187037 27189029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01281 - - gmx:547827 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01281 13 27187037 27189029 Gma13g01281 13 27187037 27189029 ECH
Gma10g00591 10 6195662 6197794 Gma13g01281 13 27187037 27189029 GST
Gma19g01790 19 47148035 47148876 Gma13g01281 13 27187037 27189029 PCT
Gma03g01739 03 43491344 43492360 Gma13g01281 13 27187037 27189029 PCT
Gma13g01281 13 27187037 27189029 Gma19g01790 19 47148035 47148876 PCT
Gma13g01281 13 27187037 27189029 Gma03g01739 03 43491344 43492360 PCT