Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01739 ATGGCGTCAAGACAGCAATTCAAGGAAGACAGAGCCGAGGCAGCTGCAAAACTCGCAGCGAAAGACATCGGCGACATCAACAGAACAAATGAGCGCGACGAGGGGTACGACTTGCACGACGAAGCCAACTTCAAGCAAGCACGAGCTGAAGCAGCTGCAAAGCTGGCGGCCAAGGATCTGGAGGACGCTAACAGATTAAGAGACAACACTTTCAACACATGGAAAGAGCAACATCAGCATGATGAGAACAAACCCGGTGTGATTGGGTCCATGTTTAGAGCCGCCAAGGAAGCCGTGGTTGGGAAGCCTCACCACGAGGAAGTTTATGCAAAGGAAACAAAGATGGGTGAATATTCAGATTATGCGACTCAGAAGGCGAGGGAAACGAAGCAGAAGGCTGGGGAGTATACAGACTATGCGGCTCAGAAAGCAAAAGAAACCAAAGACTATGCTgctgagaaggctaagaatgctaaagataccactgtgcagaaagctggagagtacaaggattataccgctgagaaggctaagaatgctaaagataccactgtgcagaaagctggagaatacaaggattataccgctgagaaggcAATTGAAGGGAAGGACAGTGCAGTGGGGAAGCTTGGGGAGCTAAAGGAATCTGCTGCTGATGCTGCTAAAAGGGCTATGGGTTTCTTCACCGGTGGCAACAAAGACCAAACTAGAGAGGAGGAGGAGGAAACGAGGCGGAGTATGCAGGAGGTGAGGGTGCAAGATAAGGATTATGGAACGGGACGTGGTACTGGAGAGAAGTTGGTGATAAAAATGGAAGAGTCGCGGCCAGGAGCGGTGGCGGATGCGCTCAAAGCAGCGAATAGGGCCATGGACGGCGATATGGAGGAGGAAGGCGTGCTTCATGTGGAGCGTCGTAGGGAGAAAATGTGA 930 0.4366 MASRQQFKEDRAEAAAKLAAKDIGDINRTNERDEGYDLHDEANFKQARAEAAAKLAAKDLEDANRLRDNTFNTWKEQHQHDENKPGVIGSMFRAAKEAVVGKPHHEEVYAKETKMGEYSDYATQKARETKQKAGEYTDYAAQKAKETKDYAAEKAKNAKDTTVQKAGEYKDYTAEKAKNAKDTTVQKAGEYKDYTAEKAIEGKDSAVGKLGELKESAADAAKRAMGFFTGGNKDQTREEEEETRRSMQEVRVQDKDYGTGRGTGEKLVIKMEESRPGAVADALKAANRAMDGDMEEEGVLHVERRREKM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01739 309 PANTHER DAUER UP-REGULATED-RELATED 43 114 - -
Gma03g01739 309 Pfam Late embryogenesis abundant protein 129 158 IPR004238 -
Gma03g01739 309 Pfam Late embryogenesis abundant protein 170 213 IPR004238 -
Gma03g01739 309 Pfam Late embryogenesis abundant protein 148 191 IPR004238 -
Gma03g01739 309 Gene3D - 168 230 - -
Gma03g01739 309 PANTHER DAUER UP-REGULATED-RELATED 1 40 - -
Gma03g01739 309 PANTHER DAUER UP-REGULATED-RELATED 113 270 - -
Gma03g01739 309 MobiDBLite consensus disorder prediction 233 272 - -
Gma03g01739 309 Coils Coil 233 253 - -
Gma03g01739 309 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 40 - -
Gma03g01739 309 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 113 270 - -
Gma03g01739 309 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 43 114 - -
Gma03g01739 309 MobiDBLite consensus disorder prediction 224 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01739 Gma-Chr3 43491344 43492360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01739 - - gmx:547500 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01739 03 43491344 43492360 Gma03g01739 03 43491344 43492360 ECH
Gma19g01790 19 47148035 47148876 Gma03g01739 03 43491344 43492360 GST
Gma03g01739 03 43491344 43492360 Gma10g00591 10 6195662 6197794 PCT
Gma03g01739 03 43491344 43492360 Gma13g01281 13 27187037 27189029 PCT
Gma10g00591 10 6195662 6197794 Gma03g01739 03 43491344 43492360 PCT
Gma13g01281 13 27187037 27189029 Gma03g01739 03 43491344 43492360 PCT