Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01252 ATGATTGAAATTAACATGAAGCATCAAGGCAAGCTTAGAGTGTTTCTTCCAAATATGATAATACTTGTAACCATCCTTCTCCATTCAACAACATGGATTAGTGCACAGGAAGTTGAGGATGAAAGTGAGTTTGATTACATAAAAGGGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAGAGTGGCAAAATGCAATCTCCAATTGATTTGTCAAGCCACAGAGTGAGAGTGGTGCCAAAGTTAGGGGAGCTTAAGAAGTACTATACGCCTCAGAATGCCACTATCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGAAGATGCAGGATCAATAAACATCAACGGCACCGAGTTTTTTCTTCATCAATGCCATTGGCATTCACCTTCAGAACATACCATCAATGGCAGGAGGTATGACTTGGAGCTCCACATGGTTCATGAAAGCAAAAACATAAAAGGAAAAACCAAATTTGCTGTTGTTGGACTTTTCTATAAGATTGGTCGGCCCGATCCTGTTCTGAAAAAGTTGTCAAAATTCATAAAAACCATGGTGTATGGAGAAGAAAAGAACATTGGGGTGTTTGATCCCTCAAAAATTAAGTTGGGTGGCAAGAAATACTACAGATACATGGGTTCCCTCACTGTCCCTCCTTGCACAGAAGGTGTCATTTGGACTATTAATAAAAAGATAAGAACTGTGTCGAGGGCTCAAGTCAAGTTACTTAGAGAGGCTGTCCACGATCATGCAGAGAAGAATGCCAGACCTATACAACCCATAAATAGACGAGGGATACAACTCTATGCCCAAAAGCGGAAGGAATAA 849 0.4122 MIEINMKHQGKLRVFLPNMIILVTILLHSTTWISAQEVEDESEFDYIKGSEKGPSHWGELKKEWETCKSGKMQSPIDLSSHRVRVVPKLGELKKYYTPQNATIKNRGHDIELKWEDAGSININGTEFFLHQCHWHSPSEHTINGRRYDLELHMVHESKNIKGKTKFAVVGLFYKIGRPDPVLKKLSKFIKTMVYGEEKNIGVFDPSKIKLGGKKYYRYMGSLTVPPCTEGVIWTINKKIRTVSRAQVKLLREAVHDHAEKNARPIQPINRRGIQLYAQKRKE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01252 282 SMART Carb_anhydrase_2a 46 277 IPR001148 -
Gma13g01252 282 Gene3D Alpha carbonic anhydrase 40 282 IPR036398 -
Gma13g01252 282 PANTHER ALPHA CARBONIC ANHYDRASE 3 18 280 - -
Gma13g01252 282 ProSitePatterns Alpha-carbonic anhydrases signature. 138 154 IPR018338 GO:0004089|GO:0008270
Gma13g01252 282 CDD alpha_CA_prokaryotic_like 53 275 IPR041891 -
Gma13g01252 282 SUPERFAMILY Carbonic anhydrase 43 273 IPR036398 -
Gma13g01252 282 Pfam Eukaryotic-type carbonic anhydrase 53 274 IPR001148 -
Gma13g01252 282 PANTHER CARBONIC ANHYDRASE 18 280 IPR023561 GO:0004089|GO:0008270
Gma13g01252 282 ProSiteProfiles Alpha-carbonic anhydrases profile. 42 277 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01252 Gma-Chr13 26844895 26848048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01252 K01674 - gmx:100819340 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01252 13 26844895 26848048 Gma13g01252 13 26844895 26848048 ECH
Gma10g00541 10 5567232 5570681 Gma13g01252 13 26844895 26848048 GST
Gma13g01252 13 26844895 26848048 Gma19g01755 19 46850307 46852785 PCT
Gma13g01252 13 26844895 26848048 Gma03g01704 03 43211559 43213932 PCT