Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00541 ATGAGTGCCTCAGTCATTGTTTCTCTTTCACATCTAACAAGTATGAAGCTTCAAAGAGTGAATACATATATAATTCCACATTTATTCGTGCTTTTCATAATCTTGTTAGCTTCAACATCAACACGAGCACAAGTTGAAGAACTTGAGGACGAGAGAGAGTTCGATTATATTGGAGCAAGTGAAAAGGGGCCTCGTCACTGGGGAGAGATGAAAAAAGAATGGTCATCTTGTAAAAATGGACACTTGCAATCTCCCATAGACTTGTCATGTGCAAGAGTCAAAATTATCCCTCGATGTCGCCAACCTGATATATACTACACAGCTACTAATGCCACTATCATCAACAGAGGCCATGATATTGCTGTATATTGGAAGGATGATGCTGGTTCAGTATACCTCAATGGAACCGAATACTTTCTGAAACAATGTCATTGGCACTCTCCTTCGGAACATTCCATGAATGGCAGGAGGTATGACTTGGAGATGCACATGGTGCATGTAAGTCCGGACAACAAGATTTTTGTGGTTGGAGCTCTCTATAAGTTTGGTCATCGTCCTGATCGTTTTCTCTCTCAGTTGGAGAAAGACATAAAGCACCTGGTTGATAATGAAGTAGAAAGAGCAATTGGAGAGACAAATCCCTCAGGATTACAGACAAGAGGCAATGCGTATTACAGATACGTAGGTTCACTCACCACTCCTCCTTGTACTGAAGGTGTCATCTGGAACATTGATAGAAAGATTAGGACAGTTTCGGAAGAACAAGTGAGGCTTTTGAGGGAGGCAGTGCATGACCATGCAGAGAGGAATGCAAGGCCAATGCAGCGACGTTACAATCGAGATATATTATACTTCCGATCCAAAAGCAGAGCAAAACCAGAATATTATTAA 891 0.4141 MSASVIVSLSHLTSMKLQRVNTYIIPHLFVLFIILLASTSTRAQVEELEDEREFDYIGASEKGPRHWGEMKKEWSSCKNGHLQSPIDLSCARVKIIPRCRQPDIYYTATNATIINRGHDIAVYWKDDAGSVYLNGTEYFLKQCHWHSPSEHSMNGRRYDLEMHMVHVSPDNKIFVVGALYKFGHRPDRFLSQLEKDIKHLVDNEVERAIGETNPSGLQTRGNAYYRYVGSLTTPPCTEGVIWNIDRKIRTVSEEQVRLLREAVHDHAERNARPMQRRYNRDILYFRSKSRAKPEYY 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00541 296 Pfam Eukaryotic-type carbonic anhydrase 63 284 IPR001148 -
Gma10g00541 296 Gene3D Alpha carbonic anhydrase 50 293 IPR036398 -
Gma10g00541 296 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 9 295 - -
Gma10g00541 296 SUPERFAMILY Carbonic anhydrase 54 284 IPR036398 -
Gma10g00541 296 PANTHER CARBONIC ANHYDRASE 9 295 IPR023561 GO:0004089|GO:0008270
Gma10g00541 296 CDD alpha_CA_prokaryotic_like 63 284 IPR041891 -
Gma10g00541 296 ProSiteProfiles Alpha-carbonic anhydrases profile. 52 286 IPR001148 -
Gma10g00541 296 ProSitePatterns Alpha-carbonic anhydrases signature. 149 165 IPR018338 GO:0004089|GO:0008270
Gma10g00541 296 SMART Carb_anhydrase_2a 56 286 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00541 Gma-Chr10 5567232 5570681 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00541 K01674 - gmx:100784540 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00541 10 5567232 5570681 Gma13g01252 13 26844895 26848048 GST
Gma10g00541 10 5567232 5570681 Gma19g01755 19 46850307 46852785 PCT
Gma10g00541 10 5567232 5570681 Gma03g01704 03 43211559 43213932 PCT