Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01143 ATGAATGTTGTAGGCAAAGTTGGAAGCTTGATAACTCAAGGTGTGTACTCAGTTGCTACCCCTTTTCACCCATTTGGTGGGGCTGTTGATGTGATTGTTGTTCAGCAACAAGATGGGACATTTCGAAGCACGCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCGGAGAAGTTTGTTAGGATAAATGTTAATGGTGTTGAGGCCAATTTTCATATGTATCTTGACAATTCGGGGGAGGCTTATTTTTTGAAGGAGGTGGATGATGATAAAGGAGTTGATTCGATTGAGGCTGTTCAAGATTCTATTGACAAAAAGAATGGCTATTTGATTAATGTTCATAGACTTGATCATAGCATCTCGGATTCTGGGGTGCTTCGGTTGAAAGATGAGAGTGATTCCTTGGTTGTGTCTCAACTTCAAAGGGCAGAATCCGACATTGATAGGAGATTTTATGAATTCCCGGATGATCGATCTTCTTTAGAAGATTCAGTTGAGTTGTCAGAATATGAGTCTAATTCATATGAGAGCCTAGAGGGAGACAATTTTGGGGAGTCACAGGGTTCACATCCAGAGATGGTCTTGGTGAGTGTTGACGGTCATATATTGACTGCCCCTATCTCAGAATCAGAGCAGGCTGAGGAGAATGTGCAGTTAAAAACTCCTCAATTTCATCTGGGACCGGGTGAAGAGACTGACTTATGTGAAGGCAACGGAGAGTTTAGTACTGGTGAAAATGCTTGGGCTGCTGGTTATATTAATCAGTTGGGTGCTCAAACAACTAATGTCCAACCCAGACTTTGCGACACTAATGGTGATGATAATACTTCTAAGCTTTTGCTTAAACTTTGTCAAGGAGAGGAAGCACATATCTGTGAAGCACAGGATACCTTGGAGATTAAAAATCAAGATCATATAAAAACTGATTCAAAAGGGGCTGCATCAGGTATCAAGAGGGAGAATGTTTTCAAAAGCTATTTGGAGCTACAAGATTTTGGTCAGCAGGCTGGAAATGCTGATTTACAAGATATAGGTTCTTCATTGGAGATTCAAAATTCAGCAGAGGAATCTAATGCAAGTTGTCCTGTAGTTGATGAAAATGAACAAGAGAGCATTGCAATATCTAAAAACGGTGATGAGTTATCACCTCATAGTGGTTCTACTTCTTCTAATGGCCATAGATCTCTGAAATCAGAGTTGGAAATTCAAGAGGTTGAGAAAAATGCATCTGGAAAAATTGAAACTGCTTCTGGCTCTCATTCTGTTACTACTGATACTGAACAGAATGATGAACATGTTGACAAGTCAGTATCAAATGATGAGTTAGATGAGAGTCAACAAACCCCTGCACTCAAAGATGTTAGGGCTACAAGTGAGGTGGTGGAGCCTCAAACAGAAACTTCAAATAAAGGGGATCAAAGCCATTTGGGTTTGGGATTTGAGATGTCCCTTTGTGGTCATGAACTTAAGGTGGGCATGGGTTCAATAGCGGCTGCTGAAGTGTTTGAAGCACATCGCATATCTGTAGTTGACTTCACAAGTTCTGCTCCATCAATAATTAAAAATCAAAATCTTGTTATCAAGTTTAAAGAGAGGTACATGACATGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGGCTGTTTATGGTTTAGATTTACCTGTTGAGTCCAAAGATACAATTCCTGTGGAACAGGATCATGCATTGAAGTCCAGGGATGATGATCTGGGATCATCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGGAAGGTCAAAACATTTGAGCATACTAATAGCAACTCATCAAATGAGGAGGTATTTCTAGATTCTGAGTCTGGATCTCTGATAGAACCAACTCCAACATCCAGTACCCAGGGATCTTCTCATAAGCAATTTCTAAGAACAAATGTTCCCACTACTGAGCAGATAGCATCCTTAAATCTCAAAGAGGGTCAAAATTTGGTAACCTTCAGTTTCTCCACAAGGGTTCTTGGAACACAACAGGTTGATGCTCATATTTATTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGACGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAATCTGGAGTGGCAAGGCTTTTCTGTGCTATTAAGGAAAATGGATACCAACTACTTTTTCTGAGTGCGCGTGCAATTGTCCAGGCATATCTAACCAGAAACTTCTTGCTTAACCTGAAACAGGATGGAAAAACCTTACCAAATGGACCTGTGGTTATCTCACCTGATGGATTATTTCCCTCACTTTACCGTGAAGTGATAAGAAGGGCACCTCACGAGTTCAAGATTGCTTGTTTAGAGGATATCAAAAGACTTTTCCCATCTGACTATAATCCATTCTACGCTGGATTTGGCAATAGAGATACAGATGAACTTAGTTACAGAAAGATTGGAGTCCCGAAGGGCAAAATATTTATTATCAACCCTAAGGGTGAGGTAGCTATTAGTCACCGTATTGGTGCAAAGTCGTATACGTCATTACATACCCTCGTCAATGACATGTTTCCTCCAACTTCTTTGGTCGAGCAGGAGGACTACAACTCATGGAATTATTGGAAAACACCATTGCCAGATATTGATTAG 2673 0.4059 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKFVRINVNGVEANFHMYLDNSGEAYFLKEVDDDKGVDSIEAVQDSIDKKNGYLINVHRLDHSISDSGVLRLKDESDSLVVSQLQRAESDIDRRFYEFPDDRSSLEDSVELSEYESNSYESLEGDNFGESQGSHPEMVLVSVDGHILTAPISESEQAEENVQLKTPQFHLGPGEETDLCEGNGEFSTGENAWAAGYINQLGAQTTNVQPRLCDTNGDDNTSKLLLKLCQGEEAHICEAQDTLEIKNQDHIKTDSKGAASGIKRENVFKSYLELQDFGQQAGNADLQDIGSSLEIQNSAEESNASCPVVDENEQESIAISKNGDELSPHSGSTSSNGHRSLKSELEIQEVEKNASGKIETASGSHSVTTDTEQNDEHVDKSVSNDELDESQQTPALKDVRATSEVVEPQTETSNKGDQSHLGLGFEMSLCGHELKVGMGSIAAAEVFEAHRISVVDFTSSAPSIIKNQNLVIKFKERYMTWEKAAPLVLGMAVYGLDLPVESKDTIPVEQDHALKSRDDDLGSSSSGRRWRLWPIPFRKVKTFEHTNSNSSNEEVFLDSESGSLIEPTPTSSTQGSSHKQFLRTNVPTTEQIASLNLKEGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFCAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGVPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWKTPLPDID 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01143 890 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 484 591 IPR031703 -
Gma13g01143 890 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 890 - -
Gma13g01143 890 SMART lns2 690 846 IPR031315 -
Gma13g01143 890 Pfam LNS2 (Lipin/Ned1/Smp2) 644 866 IPR013209 -
Gma13g01143 890 SUPERFAMILY HAD-like 682 832 IPR036412 -
Gma13g01143 890 MobiDBLite consensus disorder prediction 464 478 - -
Gma13g01143 890 MobiDBLite consensus disorder prediction 429 445 - -
Gma13g01143 890 PANTHER LIPIN 1 890 IPR026058 -
Gma13g01143 890 MobiDBLite consensus disorder prediction 379 400 - -
Gma13g01143 890 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Gma13g01143 890 MobiDBLite consensus disorder prediction 413 478 - -
Gma13g01143 890 MobiDBLite consensus disorder prediction 414 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01143 Gma-Chr13 25613712 25621194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01143 K15728 - gmx:100795884 1754.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00435 10 4192149 4200209 Gma13g01143 13 25613712 25621194 GST
Gma19g01658 19 45960687 45967405 Gma13g01143 13 25613712 25621194 PCT
Gma03g01613 03 42333719 42339906 Gma13g01143 13 25613712 25621194 PCT
Gma13g01143 13 25613712 25621194 Gma19g01658 19 45960687 45967405 PCT
Gma13g01143 13 25613712 25621194 Gma03g01613 03 42333719 42339906 PCT