Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01613 ATGAATGTGGTTGTCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCTACCCCTTTTCATCCCTTTGGTGGGGCTGTTGACGTCATTGTTGTTCAGCAGCAAGATGGTACGTTCCTGTGCACACCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTGCTGAGAAGATTGTTCGGATAAATGTCAATGGGGTGGAGGCAAACTTCCACATGTATCTTGACAATTCAGGGGAGGCTTATTTTGTCAAAGAGGTGGATGATGATTGTGGTGATAAAGGAATCAAGTCAATTGGGGTTGTTGATAACTCTGAATTTAGACAAGAAGATGGCGGTGTTGAAATTGATAAAAAGGATAATAGTTATCTGAGTATGAATGATACGCTTGGTTATAGACTTAAGCATAGCATATCTGATTCAGGGGTGCCATATCTTACGGGTCCACTTGATGTTTCTGAATATGAGTCTAGTCGATATGAAAATCTAGATGTAGAGAATTTGGTGGACTCACAGGGTTCCCAGCCGGAGGTGGTCTTGGTCAGTGTTGATGGTCATGTACTGATGGCCCCTATCTCAGAATCTGAGCAGAATGAGGACAATGTGCAGTTAAAAACTCCTCAATTTCATCTAGGCCCAGGTGAAGAGATTGACTTCTATGAAGGCAATGGGGAATTTATTTCTGATGAAAACGCTTGGGCTGCTGATTATGTTAGTCAGGTGGATTCTTCAACAGCTGATGTTCCAGCTAGTAGTTATGACACTAAGGTTGGTGATGATACTTCTGGGCTCCTGTTGGAAGCTCAAAGAAAGGAGGTAACTAGTTGTCACATTGAGGAAACCTTGGTAATTAAAAATCATGAAGATCATCATTTGCAAACTGATTCAGAAGAGGTTGTATCCTGTATGAAGAGACAGATTGTCTTCAAAAGTTGTTTGGAATTACACGAGTTTACTCAGCAGGCTGGAAATGCTGATTTACAAGATGTAGGTTCTTCATTGGAGGTTCAAAATTCAGCAGATGAATCTAATGCAAATTGCTCAATTAAGGATGAAAAGGAACAGGAAAACATCAAACAATCTAGAAACATTGACGACTTATCTCCCCTTAGTGGGCCTACTTCCTTGGATGAACATAGTTCCCTAGGATTAGAAGTAGAACTTCAAGAGGTTGATAAAGATGCACCAGTAGAAGTTGACGCTGGTTCTGGCAGTCATTCTGGTACTGAGGATATTATTGAATGTAATGATGAACATGTTGGAAAGTCAGTATCAAATGACCAGGTAGATGACAGTCAACAAACCTCTGCACTTGAGGATTCTTGTAAGAAAAGTGAACTAACTGAACCTCAAACAGAAATTTCCAATGAGGAGGACCAAAGTCATTCTGCTTTGAGGTTTAAGGCCTCACTTTGTGGTCATGAACTTAAAGCGGGTATGGGTTTCGTTGCTGCTGCTGAGATTTTTGAAGCACATCAGATATCTGCAGAAGAATTTAGAAGTTCTGCGTCATCCATAATTAAGAATGAAAATCTTGTTCTGAAGTTCAGAGAAAGGTATCTGCTGTGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGACTGTATTTGGTTTAGACTTACCTATTGAGCCCAAAGATACAATTCCAGTGGGGCAGGATGATGCAGTGAAGGCCAATAATGATGCACCTGGACCAGCTTCGTCTGGACGCAGATGGAGACTTTGGTCTATGCCTTTTCGAAGAGTCAAGACAATTGATCACACTGGTAGTGTATCAAGTAAGGAGGTATTTGTAGATTCTGAGTCTGATTGGCAAACTCCTGTTGTCGAGCCATCTCCAACATCTGCCAGGCATGAGTCTCCTCGCAAGCAATTTGTGAGGACAAATGTTCCCTCCAATAAGATGATAGCATCCTTAAATCTCAAAGATGGTCAAAATTTGGTAAACTTCAATTTCTCTTCCAGGGTTCTTGGAAAGCAACAGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACAATTACCAAATCTGATGTTTTGGGGCAGTTTATGCCTTTAGTTGGAAAAGATTGGTCACAGTCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAAGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAGGCTTATCTAACCAGGAACTTTTTGCTTAACCTGAAACAGGATGAAAAGACCTTACCGAATGGTCCTGTAGTTATTTCACCTGATGGATTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTCCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCGTTCTATGCGGGGTTTGGCAATAGAGACACGGATGAACTTAGTTACAGGAAGATAGGAATCCCGAAGGGCAAGATATTTATTATTAATCCTAAGGGTGAGGTAGCAATAAGTCATCGTATTGATGCAAAATCTTACACATCATTGCACACACTCGTCAAGGATATGTTCCCTCCTACTTCTTTGGTTGAACAGGTGGACTTCAACTCATGGAATTATTGGAGAATGCCTTTTTCAGACGTTGATTAG 2640 0.4091 MNVVVKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFLCTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMYLDNSGEAYFVKEVDDDCGDKGIKSIGVVDNSEFRQEDGGVEIDKKDNSYLSMNDTLGYRLKHSISDSGVPYLTGPLDVSEYESSRYENLDVENLVDSQGSQPEVVLVSVDGHVLMAPISESEQNEDNVQLKTPQFHLGPGEEIDFYEGNGEFISDENAWAADYVSQVDSSTADVPASSYDTKVGDDTSGLLLEAQRKEVTSCHIEETLVIKNHEDHHLQTDSEEVVSCMKRQIVFKSCLELHEFTQQAGNADLQDVGSSLEVQNSADESNANCSIKDEKEQENIKQSRNIDDLSPLSGPTSLDEHSSLGLEVELQEVDKDAPVEVDAGSGSHSGTEDIIECNDEHVGKSVSNDQVDDSQQTSALEDSCKKSELTEPQTEISNEEDQSHSALRFKASLCGHELKAGMGFVAAAEIFEAHQISAEEFRSSASSIIKNENLVLKFRERYLLWEKAAPLVLGMTVFGLDLPIEPKDTIPVGQDDAVKANNDAPGPASSGRRWRLWSMPFRRVKTIDHTGSVSSKEVFVDSESDWQTPVVEPSPTSARHESPRKQFVRTNVPSNKMIASLNLKDGQNLVNFNFSSRVLGKQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWSQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDEKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIPCLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDAKSYTSLHTLVKDMFPPTSLVEQVDFNSWNYWRMPFSDVD 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01613 879 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 149 - -
Gma03g01613 879 MobiDBLite consensus disorder prediction 366 382 - -
Gma03g01613 879 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Gma03g01613 879 SMART lns2 679 835 IPR031315 -
Gma03g01613 879 MobiDBLite consensus disorder prediction 426 465 - -
Gma03g01613 879 MobiDBLite consensus disorder prediction 355 384 - -
Gma03g01613 879 SUPERFAMILY HAD-like 671 821 IPR036412 -
Gma03g01613 879 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 154 879 - -
Gma03g01613 879 MobiDBLite consensus disorder prediction 446 465 - -
Gma03g01613 879 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 472 579 IPR031703 -
Gma03g01613 879 MobiDBLite consensus disorder prediction 430 445 - -
Gma03g01613 879 PANTHER LIPIN 154 879 IPR026058 -
Gma03g01613 879 PANTHER LIPIN 1 149 IPR026058 -
Gma03g01613 879 Pfam LNS2 (Lipin/Ned1/Smp2) 634 855 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01613 Gma-Chr3 42333719 42339906 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01613 K15728 - gmx:100780784 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01658 19 45960687 45967405 Gma03g01613 03 42333719 42339906 GST
Gma03g01613 03 42333719 42339906 Gma10g00435 10 4192149 4200209 PCT
Gma03g01613 03 42333719 42339906 Gma13g01143 13 25613712 25621194 PCT
Gma10g00435 10 4192149 4200209 Gma03g01613 03 42333719 42339906 PCT
Gma13g01143 13 25613712 25621194 Gma03g01613 03 42333719 42339906 PCT