Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01125 ATGGCTCCACCAATTGAGACCCCAAACAAGGTTTCCAGCTATCAACAGTCCCCAAACCCTCGTCTTAACGAGAGGATTCTTTCATCCATTTCCAGGAGACACGTTGCTGCACACCCGTGGCACGATCTTGAGATAGGACCCGAAGCTCCAAAGATCTTCAACTGTGTGGTCGAAATAGGGAAAGGAAGCAAGGTGAAATATGAACTTGACAAAAGAACTGGACTTATTATGGTTGATCGTATACTTTACTCATCAGTTGTTTATCCTCACAACTATGGGTTTATTCCACGTACTATTTGTGAGGACGGTGATCCCATGGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCGGGTTGCTTTCTTCGGGCCAAAGCTATTGGTCTCATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATAATTGCTGTCTGTGCTGATGATCCTGAGTATAGGCATTACAATGATATCAAGGAGCTTCCTCCACACCGTTTAGCTGAAATTCGTCGTTTCTTTGAAGATTACAAGAAGAATGAGAACAAGGAAGTTGCAGTGAACGACTTTCTTCCTGCCTCAGCTGCCTATGAAGCGATCAAGCATTCCATGACCTTATATGCGGAATACGTTGTGGAGAACTTGAGGCGGTAG 651 0.4455 MAPPIETPNKVSSYQQSPNPRLNERILSSISRRHVAAHPWHDLEIGPEAPKIFNCVVEIGKGSKVKYELDKRTGLIMVDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAYEAIKHSMTLYAEYVVENLRR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01125 216 CDD pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g01125 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g01125 216 PANTHER INORGANIC PYROPHOSPHATASE 18 212 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g01125 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g01125 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g01125 216 PANTHER BNAC07G03580D PROTEIN 18 212 - -
Gma13g01125 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Gma13g01125 216 SUPERFAMILY Inorganic pyrophosphatase 32 211 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01125 Gma-Chr13 25380564 25384933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01125 K01507 - gmx:100527417 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00418 10 4010512 4014433 Gma13g01125 13 25380564 25384933 GST
Gma19g01641 19 45790683 45794065 Gma13g01125 13 25380564 25384933 PCT
Gma03g01592 03 42158105 42161680 Gma13g01125 13 25380564 25384933 PCT
Gma13g01125 13 25380564 25384933 Gma19g01641 19 45790683 45794065 PCT
Gma13g01125 13 25380564 25384933 Gma03g01592 03 42158105 42161680 PCT