Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01592 ATGGTTGAAACCGATATGGATGCCGAAACTGTTGCAAATGTGGTTCCACCAAAGGAGACTCCAAACAGTGTTCCCATCTCTTATCATTCCTCACACTCACACCCTCCTCTTAATGAGAGGATTATTTCATCCATGACCAGAAGATCTGTTGCTGCACACCCGTGGCACGACCTTGAGATAGGGCCTGGTGCTCCAACGATCTTCAATTGTGTGATTGAGATTGGGAAAGGGAGCAAGGTGAAATATGAACTGGACAAAAAATCGGGGCTTATCAAGATCGACCGTGTTCTTTACTCATCAGTTGTGTATCCTCACAATTATGGGTTTATCCCACGTACTATTTGTGAGGACAGTGATCCCCTGGATGTCTTGATTATTATGCAGGAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGGGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATGATCCCGAGTATCGACATTACAATGATATCAAGGAGCTTCCTCCACATCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTCGCAGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAG 696 0.4483 MVETDMDAETVANVVPPKETPNSVPISYHSSHSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPTIFNCVIEIGKGSKVKYELDKKSGLIKIDRVLYSSVVYPHNYGFIPRTICEDSDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAVNRSMSLYADYIVESLRR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01592 231 PANTHER BNAC07G03580D PROTEIN 37 230 - -
Gma03g01592 231 MobiDBLite consensus disorder prediction 15 34 - -
Gma03g01592 231 ProSitePatterns Inorganic pyrophosphatase signature. 117 123 - -
Gma03g01592 231 CDD pyrophosphatase 67 219 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma03g01592 231 SUPERFAMILY Inorganic pyrophosphatase 45 226 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma03g01592 231 Hamap Inorganic pyrophosphatase [ppa]. 66 222 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma03g01592 231 Gene3D Inorganic pyrophosphatase 49 227 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma03g01592 231 Pfam Inorganic pyrophosphatase 70 221 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma03g01592 231 PANTHER INORGANIC PYROPHOSPHATASE 37 230 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01592 Gma-Chr3 42158105 42161680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01592 K01507 - gmx:100500040 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01641 19 45790683 45794065 Gma03g01592 03 42158105 42161680 GST
Gma03g01592 03 42158105 42161680 Gma10g00418 10 4010512 4014433 PCT
Gma03g01592 03 42158105 42161680 Gma13g01125 13 25380564 25384933 PCT
Gma10g00418 10 4010512 4014433 Gma03g01592 03 42158105 42161680 PCT
Gma13g01125 13 25380564 25384933 Gma03g01592 03 42158105 42161680 PCT