Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00886 ATGAGTTTCATCTTTGGAAAGAGGAAAACTCCCGCAGAACTTTTGCGGGAAAATAAGAGAATGCTGGACAAATCAGGGGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACAAGGCATCAGATTGAAAAGTTTTATAAGCTCAAATCACAGCTCCAGGGTACTTTGAAATCAACACAAGCAATGGGTGAGGCAATGAAAGGTGTGACTAAGGCAATGGGACATATGAATAGGCAGATGAACTTGTCATCATTGCAGAAAATCTTACAAGAATTTGAGACACAGAATGAGAGGATGGAATTGATTACAGAGGTGACGAGAGACGCAATAGATGATGCTTTGGAAGGGGATGAGGAAGAAGAAGAAACAGAAGACCTAGTGAACCAGCTTTTGAATGCACCATCAAATGCTGTTGCTGCCTCAGCTACAAAGACTAAGGTGCCTCAAGTTGGAACTGTTGGGAAGGATGCTGCTGCGATAGATAGCTATTTACAGGCAAGGTTATGCAATTTAAGAAAAATGCAATCTTCATTCTGA 537 0.4097 MSFIFGKRKTPAELLRENKRMLDKSGAVKVMAKDLVRTRHQIEKFYKLKSQLQGTLKSTQAMGEAMKGVTKAMGHMNRQMNLSSLQKILQEFETQNERMELITEVTRDAIDDALEGDEEEEETEDLVNQLLNAPSNAVAASATKTKVPQVGTVGKDAAAIDSYLQARLCNLRKMQSSF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00886 178 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 25 IPR005024 GO:0007034
Gma13g00886 178 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 25 174 IPR005024 GO:0007034
Gma13g00886 178 Coils Coil 82 102 - -
Gma13g00886 178 Gene3D - 25 143 - -
Gma13g00886 178 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 25 - -
Gma13g00886 178 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 25 174 - -
Gma13g00886 178 Pfam Snf7 24 149 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00886 Gma-Chr13 23074112 23076788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00886 K12191 - gmx:100819241 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00886 13 23074112 23076788 Gma13g00886 13 23074112 23076788 ECH
Gma17g00480 17 3951354 3953876 Gma13g00886 13 23074112 23076788 GST
Gma13g00886 13 23074112 23076788 Gma15g01625 15 16149148 16154327 PCT
Gma15g01625 15 16149148 16154327 Gma13g00886 13 23074112 23076788 PCT