Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00790 ATGTCCGTTTCCATGAGAGATCTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGGCCGGATTGGAAATATGGCGTATCGAGAATTTTAATCCAGTTGCCATCCCTCAGTCATCTTATGGAAAGTTTTTCACTGGGGACTCCTATGTGATCTTGAAGACAACTGCTTCAAAAAGTGGTGCTCTTCGTCATGATATCCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGCGCTGCAGCCATCAAGACAGTCGAGTTGGATGCAGCTTTAGGAGGACGGGCTGTTCAGTATCGTGAAGTACAAGGTCATGAAACTGAAAAGTTCCTCTCTTATTTCAAACCATGCATCATACCTCAAGAAGGTGGGGCTGCCTCAGGTTTTAAGCATGTTGAGGCTGAAGAACATAAGACACGGTTGTTTGTGTGCAAAGGGAAACATGTGGTACATATTTCTTTCGCTCGATCTTCACTGAACCATGATGATATTTTTATTCTGGATACCGAGTCCAAAATTTTCCAATTTAATGGTTCCAATTCAAGTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAATATATCAAGGATACCTACCATGATGGGAAATGTGAGATAGCTTCTATTGAGGATGGAAAGTTGATGGCTGATTCTGAGAGTGGAGAATTCTGGGGTTGCTTTGGGGGCTTTGCTCCTCTTCCACGGAGAACAGTCAGTGATGATGACAAGCCTGCTGATTCTCATCCTCCAAAGCTACTTTGTGTTGACAAGGGGAAAGCAGAACCAATTGAATCCGATTCTTTGACAAAGGAATTACTGGACACAAACAAATGTTATATTCTAGATTGTGGGTTGGAAGTTTTTGCATGGATGGGAAGAAACACATCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCAGCAGATGAGTTAATCAGTGGCACTGGTCGACCAAAGTCCCATATAATTCGTGTAATTGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTGATTCTTGGCCTCAGGCAAGTCATGCAACAATGTCTGAAGAAGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGTCTCGTGAAATCTGAGCCCGAAAAAGAAGAACCTCAACCCCACATAGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGGTCCGGAAAAGATTCTTCTTCCAGCCACTGATCAGTCAAAATTTTATAATGGAGATTGCTACATCTTTCAATATTCATATCCTGGAGAAGATAAGGAAGAGTATCTTATAGGAACATGGGTTGGAAAGAATAGTGTTGAGGAAGAGAGAGCTTCAGCTCTTTCACTAGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTCCTTCCCAGGCTCGTATCTATGAAGGCAGTGAACCAATTCAATTTCATGCCATCCTGCAAAGCTGTATTGTTTTTAAGGGTGGACGTAGTGATGGATACAAGAATTACATTGCGGAGAAGGAAATTCCAGATGAGACATACAATGAGGATGGTGTTGCATTATTCCGCATCCAGGGCACTGGACCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCCTTGAATTCCGCTTATTGCTTCATACTTCATAGCGGGCCCACTGTTTTTATTTGGTCTGGAGGTTTAGCAACTTCAGATGACCAGGAGCTTGTTGAGAGAATGCTGGATTTGATTAAGCCGGATGTACAATGCAAACCACTAAAGGAAGGCCTAGAACCGGAACAGTTTTGGGATTTGTTGGGGGGAAAAACGGAATATCCCAGTCAAAAGATCACGAGGGAAGCTGAAAATGATCCTCATTTATTTTCTTGCAACTTCTCAGAAGAGATTCACAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTACACCTTGGATTGTCACTCGGAAATCTTTGTTTGGGTTGGCCAGCAGGTTGACTCAAAGAGTAGAATGCAGGCTCTAACAATTGGCGAGAAGTTTCTTGAGCATGATTTTCTCCTAGAAGGATTATCTCGTGAAGCTCCAATATATATTGTCAAAGAAGGTAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATGGGAGTCTGCAAAATCTGCAATGCTAGGAAACTCATTTCAAAGGAAGCTTGCAATCGTGAAAAATGGGGGTACACCACTTATGGTTAAACACAAACGAAGAGCATCAGTAACTTATGGGGGAAGGTCTAGTGGTGCCCCAGATAAATCCCAGCGTTCCCGTAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTGAGGGGCAGATCTCCGGCCTTTAATGCACTAGCAGCTAATTTTGAGAGCTCAAATGCAAGGAACCTTTCAACTCCACCTCCGATGATTAGAAAACTTTACCCAAAATCTATGGCACAGGATACAGCAAAATTGGCAACTAAATCTTCAGCCATAGCTCATCTTACTTCTAGTTTTGAACTAACATCAGCACGAGAAAATTTGATTCCTCGGTCACAAAAAGCGAGTTCAGTTACCCCCAAATCAAACCCTGAGACAAGTGATGAGGAGGGTTCTTTGAGCAGCAGGATAGAATCTCTTACCATACAGGAGGATGCGAAAGAGGGTGAAGCTGAAGACGATGAAGGTCTCCCAGTTTACCCGCATGAACGCGTTAACACAGCTTCTACAGATCCTGTAGAAGATATTGACGTGACTAAACGAGAGGCTTATCTGTCATCTGCAGAGTTTCAAGAGAAATTTGGGATGGCGAAGAATGAATTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCAGTTCAGTTGTTCTGA 2856 0.4265 MSVSMRDLDPAFKGAGQKAGLEIWRIENFNPVAIPQSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLFVCKGKHVVHISFARSSLNHDDIFILDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEIASIEDGKLMADSESGEFWGCFGGFAPLPRRTVSDDDKPADSHPPKLLCVDKGKAEPIESDSLTKELLDTNKCYILDCGLEVFAWMGRNTSLDERKSASGAADELISGTGRPKSHIIRVIEGFETVMFKSKFDSWPQASHATMSEEGRGKVAALLKRQGLDVKGLVKSEPEKEEPQPHIDCTGHLQVWRVNGPEKILLPATDQSKFYNGDCYIFQYSYPGEDKEEYLIGTWVGKNSVEEERASALSLASKMVESMKFLPSQARIYEGSEPIQFHAILQSCIVFKGGRSDGYKNYIAEKEIPDETYNEDGVALFRIQGTGPDNMQAIQVEPVASSLNSAYCFILHSGPTVFIWSGGLATSDDQELVERMLDLIKPDVQCKPLKEGLEPEQFWDLLGGKTEYPSQKITREAENDPHLFSCNFSEEIHNFSQDDLMTEDIYTLDCHSEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEGLSREAPIYIVKEGSEPPFFTRFFKWESAKSAMLGNSFQRKLAIVKNGGTPLMVKHKRRASVTYGGRSSGAPDKSQRSRSMSVSPDRVRVRGRSPAFNALAANFESSNARNLSTPPPMIRKLYPKSMAQDTAKLATKSSAIAHLTSSFELTSARENLIPRSQKASSVTPKSNPETSDEEGSLSSRIESLTIQEDAKEGEAEDDEGLPVYPHERVNTASTDPVEDIDVTKREAYLSSAEFQEKFGMAKNEFYKLPKWKQNKLKMAVQLF 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00790 951 Gene3D Severin 133 243 IPR029006 -
Gma13g00790 951 SUPERFAMILY VHP, Villin headpiece domain 877 951 IPR036886 GO:0003779|GO:0007010
Gma13g00790 951 CDD gelsolin_S5_like 514 605 - -
Gma13g00790 951 SUPERFAMILY Actin depolymerizing proteins 508 612 - -
Gma13g00790 951 Gene3D Severin 385 499 IPR029006 -
Gma13g00790 951 Gene3D Severin 514 609 IPR029006 -
Gma13g00790 951 SUPERFAMILY Actin depolymerizing proteins 220 344 - -
Gma13g00790 951 ProSiteProfiles Headpiece (HP) domain profile. 886 951 IPR003128 GO:0003779|GO:0007010
Gma13g00790 951 MobiDBLite consensus disorder prediction 741 772 - -
Gma13g00790 951 SUPERFAMILY Actin depolymerizing proteins 379 525 - -
Gma13g00790 951 SMART VHP_1 916 951 IPR003128 GO:0003779|GO:0007010
Gma13g00790 951 CDD gelsolin_S2_like 138 229 - -
Gma13g00790 951 SMART VILL_6 389 486 IPR007122 GO:0051015
Gma13g00790 951 SMART VILL_6 19 117 IPR007122 GO:0051015
Gma13g00790 951 SMART VILL_6 619 710 IPR007122 GO:0051015
Gma13g00790 951 SMART VILL_6 516 603 IPR007122 GO:0051015
Gma13g00790 951 SMART VILL_6 251 341 IPR007122 GO:0051015
Gma13g00790 951 SMART VILL_6 137 231 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 529 549 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 466 486 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 408 424 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 635 657 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 664 683 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 320 341 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 433 451 IPR007122 GO:0051015
Gma13g00790 951 PRINTS Gelsolin family signature 589 608 IPR007122 GO:0051015
Gma13g00790 951 Gene3D Severin 244 355 IPR029006 -
Gma13g00790 951 PANTHER VILLIN 1 951 IPR007122 GO:0051015
Gma13g00790 951 CDD gelsolin_S3_like 251 340 - -
Gma13g00790 951 CDD gelsolin_S4_like 385 482 - -
Gma13g00790 951 Gene3D Severin 7 132 IPR029006 -
Gma13g00790 951 MobiDBLite consensus disorder prediction 842 906 - -
Gma13g00790 951 Gene3D Villin headpiece domain 889 951 IPR036886 GO:0003779|GO:0007010
Gma13g00790 951 Gene3D Severin 610 726 IPR029006 -
Gma13g00790 951 SUPERFAMILY Actin depolymerizing proteins 592 708 - -
Gma13g00790 951 MobiDBLite consensus disorder prediction 842 872 - -
Gma13g00790 951 CDD gelsolin_S6_like 618 709 - -
Gma13g00790 951 Pfam Villin headpiece domain 916 951 IPR003128 GO:0003779|GO:0007010
Gma13g00790 951 SUPERFAMILY Actin depolymerizing proteins 135 239 - -
Gma13g00790 951 CDD gelsolin_S1_like 12 124 - -
Gma13g00790 951 MobiDBLite consensus disorder prediction 751 766 - -
Gma13g00790 951 Pfam Gelsolin repeat 29 111 IPR007123 -
Gma13g00790 951 Pfam Gelsolin repeat 266 334 IPR007123 -
Gma13g00790 951 Pfam Gelsolin repeat 153 213 IPR007123 -
Gma13g00790 951 Pfam Gelsolin repeat 408 478 IPR007123 -
Gma13g00790 951 Pfam Gelsolin repeat 629 703 IPR007123 -
Gma13g00790 951 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Gma13g00790 951 PANTHER VILLIN-3-LIKE 1 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00790 Gma-Chr13 22160943 22170031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00790 - - gmx:100807762 1895.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00790 13 22160943 22170031 Gma13g00790 13 22160943 22170031 ECH
Gma17g00575 17 4756832 4766272 Gma13g00790 13 22160943 22170031 GST
Gma13g00790 13 22160943 22170031 Gma15g01913 15 25692423 25695387 PCT
Gma15g01523 15 14227812 14238425 Gma13g00790 13 22160943 22170031 PCT
Gma09g00515 09 5299593 5319640 Gma13g00790 13 22160943 22170031 PCT