Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01892 ATGGAGGTGGAGACTGAAAAATCAGGGTCTGATGGGAAGGGTTGGAGTTTTTGTAGAATGCCATTTTGGCAAACAACTCATACTCCTTCTTCTTCTTCCATGTCTTACATGCACAATGTTCATCAGCAAAGTCAGAATAATGCTCAATCTGTTGATAGATCCAGTCATCATTCTTCAACAACAGTTTCATCTGTGGCCAAGTCTCTGCTCCCTACAAAGAGGAGGCTCCGCCTTGATCCTTCCAACAAGCTCTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCTGGGGGTATTCTTGCCCCTGGTGAAAGTATTATTGCCACTGTGTTCAAGTTTGTGGAGCCACCTGAGAACAATGAGAAATCAATTGATAAAAAAAGCAAGGTTAAGTTTAAAATTATGAGCTTAAAAGTGCAAGGTGAAATGGACTATGTACCGGAACTGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTGCGGGTTATGTTTCTGGACCCTGAAAGGCCTAGTCCTGTCCTGGATAAGCTTAAACGAATGTTGGCCGAGGCCGACGCTGCACTTGAAGCACGAAAGAAACCGCCAGAGGAGAAAGGTCCCCGTGTTGCTGGGGAAGGCCTTGTTATAGACGAATGGAAAGAAAGAAGAGAAAGATACTTGGCTCAACAGCAGGTCCAAGgtgttgattcagtgtaa 792 0.4293 MEVETEKSGSDGKGWSFCRMPFWQTTHTPSSSSMSYMHNVHQQSQNNAQSVDRSSHHSSTTVSSVAKSLLPTKRRLRLDPSNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKSIDKKSKVKFKIMSLKVQGEMDYVPELFDEQRDQVAIEQILRVMFLDPERPSPVLDKLKRMLAEADAALEARKKPPEEKGPRVAGEGLVIDEWKERRERYLAQQQVQGVDSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01892 263 MobiDBLite consensus disorder prediction 33 67 - -
Gma12g01892 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 29 262 IPR016763 GO:0005789
Gma12g01892 263 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 29 262 - -
Gma12g01892 263 Pfam MSP (Major sperm protein) domain 76 186 IPR000535 -
Gma12g01892 263 SUPERFAMILY PapD-like 64 205 IPR008962 -
Gma12g01892 263 Gene3D Immunoglobulins 71 201 IPR013783 -
Gma12g01892 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 197 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01892 Gma-Chr12 39590347 39594213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01892 - - gmx:100816998 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01892 12 39590347 39594213 Gma12g01892 12 39590347 39594213 ECH
Gma13g02667 13 41372752 41376541 Gma12g01892 12 39590347 39594213 GST
Gma12g01892 12 39590347 39594213 Gma12g00953 12 9948042 9951146 PCT
Gma12g01892 12 39590347 39594213 Gma06g02666 06 50191077 50193779 PCT
Gma12g00953 12 9948042 9951146 Gma12g01892 12 39590347 39594213 PCT
Gma06g02666 06 50191077 50193779 Gma12g01892 12 39590347 39594213 PCT