Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00953 ATGGCGGTGGAGAGTGACAAAACGGGTTCTGTTGGGAAAGGTTGGAGCTTTTGCAGCATGCCATTTTGGCAAACAACTCATGCTTCTTCAACTTCTTCAACAACAACTTTTTCTATGCATCATAGCGTTCACCATCAGAGCCAGATTCTTCAGTCTCTTGATAGATCCACCCATCAACCTTCCACCACTGTTTCTTCTGTGGCCAAGTCTCTTCTGCCCACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAACAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTCGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCGGGTGGTATTCTTGCACCTGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTAGCTGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACACCCTTGCCCTGCTTTGGATAAGCTTAAACGGCTGCTAGCTGAGGCTGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAGTAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAGACAGCAGGTTGAAGTGGTAGATTCTGTGTAA 798 0.4511 MAVESDKTGSVGKGWSFCSMPFWQTTHASSTSSTTTFSMHHSVHHQSQILQSLDRSTHQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPEHPCPALDKLKRLLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLARQQVEVVDSV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00953 265 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 264 IPR016763 GO:0005789
Gma12g00953 265 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 34 264 - -
Gma12g00953 265 SUPERFAMILY PapD-like 66 204 IPR008962 -
Gma12g00953 265 Pfam MSP (Major sperm protein) domain 78 188 IPR000535 -
Gma12g00953 265 Gene3D Immunoglobulins 73 203 IPR013783 -
Gma12g00953 265 ProSiteProfiles Major sperm protein (MSP) domain profile. 77 199 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00953 Gma-Chr12 9948042 9951146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00953 - - gmx:100820576 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00953 12 9948042 9951146 Gma12g00953 12 9948042 9951146 ECH
Gma12g00953 12 9948042 9951146 Gma06g02666 06 50191077 50193779 GST
Gma13g02667 13 41372752 41376541 Gma12g00953 12 9948042 9951146 PCT
Gma12g01892 12 39590347 39594213 Gma12g00953 12 9948042 9951146 PCT
Gma12g00953 12 9948042 9951146 Gma13g02667 13 41372752 41376541 PCT
Gma12g00953 12 9948042 9951146 Gma12g01892 12 39590347 39594213 PCT