Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01809 ATGGCGGAAGCCTTAGGCCCTAATCCAACGACGGACCACAAAAAGACGGTTCCCATGTCCGCTCGTATCCAATCTCCGACGAGCCCTTTCTTCGTGGGCTCCAACAACGACCAGCTTGAACGGGCCCAGACCCGTGAAGCCCGCGCCGCCGCAATCCGCCGCAAGCCCCTCGCCGCCAACTTCCACCCCCAACCATCCCATTCTCATCCCTGTCTCAACAAACACCAGATTCTCGACTTGTTCCATAACTGCATAAAACTTGCCTCCGAAAATGCAATCATCATTATCATATTCTATTATTTTGTTTTTGTTTTTGGGCAGAAAATTAATCAGAAAAACACATGGGAGTTGGATTTGATTGACCACCTCACTGATATTATTAGGTCTGAAGAAGGGAATCACGAGGAGACTAATTTTCAAATAGCAAGCTGTACACTTGAAGCTGGAGTCAAAATATACTCCTTAAGGGTGGATTCGGTGCATTCCGAGGCATATAAAGTCCTTGCTAGAATGAATAGAGCAGGCCAAGATACCGAGGAAGACACTACTTTAGGGAGTTTTAATGCTGAAAGTGGACAAGCAAGAAGGAAGGAAGTTGACAAAAAGTTCTCACCTTTATCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGACGTTGCATTTGCTGTGGATCCACTCTATCGTCAGATGTCAGCACAATTTGATGAAGGTGGAGCCAAAGGCCTTTTGATGAATAATCTTGGCATATATGGTAAATGTAGGTTGCTCTTCGATTCACTAGAAGTGCCAGGGAAGTGCATAACCAGTCAAAATGAAAGTGATATTTCAGATACAATTGATCTTTCTTTCGCCAGAGATTGTGTTGAACAAATGATATTGGACATACATACGAAGGGTGAAATCTCTCCAACTCTGAGGGTGATAGTAAATCAATTTGATGAAAATAATAAAAGGCCTTCTGATTTTCAATCTTCTACTGAGAAATCAGGTGAAGAGTTTGATGCAGCTATTGATAGTGAACTTGCCACTGAAAAAGAATATGAGAACTTCCCCTCCTGGAGTAATGATCATGATAGTGAAGCATTTCCTGCTGAATGGGGCTCTGATGATGCAGACCCAACTTTTCCAAGTTACCATCAGGAAAAAGAACCTTTTCATTCCCAAGACCCTCCTGATATGGATGACATATTTGAAAATGTTGATGGGTATTTGTTTTTGAGTCTGGGTTTTAGGTCAAAGAAAAATGCATGGGCAGGCACTGATCATTGGAAGTTTCAAAAAGCTAAAGGCTCAGAATCAGAGGTTCATCGTGCTTCTGAGGATGTGTTGGTCCAGAAAACCAGGCAGCCAGGGACAAAGAGACAAGTCGAAGTTGATTTAGATTTCACAAGTTTTGTCGAGAAAAAAATATCCGATATCTTTTCTCCTCCCAGGAATCCCAAATCATTACAGCTACCTGAAAATATACCACCTTGCATTACAAAACTTCCAGAGGACTGCCACTATGAACCAGAGGATCTTGTCAATTTATTTCTTTTGCCTTATGTAAAGTGCATTGGGAGGAAGGCAAGAAAGCTCTCAGGTGAATTTGCAGATGTATCAGGAGAACAATGCAATAACTATGAATCATTCCCTTCCTGGGACAATGGAAGTGTTTGTGATGATGATGTTACTGATGTACATAGTGAAATGGATGACTCTACCTCACTTATTTCTCAGCCACGTCAGATCAATAAAGTTGAAGTCCAGTATGACAAAACATTCAAACAAGTCAATGTTCAGGCTCTGAAAATAACACTTTGGGACCATATTCAAGAATCCGTTCAAGTTCCGATTCAGGGTAAAAAAGAAGTGGTATCTTTCAAGCACATGTTGACCAACTTTCCTAGTAAATGCAATGCTGCTGCAACTATTAGTGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGGATTGAACATCCAAAGCTGCCCCAACTTGGATGATCTTGGCATATGCCTACCTGATGATGGTGCCACTATTACTGGAACAGTTTAG 2070 0.4135 MAEALGPNPTTDHKKTVPMSARIQSPTSPFFVGSNNDQLERAQTREARAAAIRRKPLAANFHPQPSHSHPCLNKHQILDLFHNCIKLASENAIIIIIFYYFVFVFGQKINQKNTWELDLIDHLTDIIRSEEGNHEETNFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRAGQDTEEDTTLGSFNAESGQARRKEVDKKFSPLSTLESSFEVLNVKKFDVAFAVDPLYRQMSAQFDEGGAKGLLMNNLGIYGKCRLLFDSLEVPGKCITSQNESDISDTIDLSFARDCVEQMILDIHTKGEISPTLRVIVNQFDENNKRPSDFQSSTEKSGEEFDAAIDSELATEKEYENFPSWSNDHDSEAFPAEWGSDDADPTFPSYHQEKEPFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGTDHWKFQKAKGSESEVHRASEDVLVQKTRQPGTKRQVEVDLDFTSFVEKKISDIFSPPRNPKSLQLPENIPPCITKLPEDCHYEPEDLVNLFLLPYVKCIGRKARKLSGEFADVSGEQCNNYESFPSWDNGSVCDDDVTDVHSEMDDSTSLISQPRQINKVEVQYDKTFKQVNVQALKITLWDHIQESVQVPIQGKKEVVSFKHMLTNFPSKCNAAATISDISPHLCFICLLHLANEKGLNIQSCPNLDDLGICLPDDGATITGTV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01809 689 MobiDBLite consensus disorder prediction 354 395 - -
Gma12g01809 689 MobiDBLite consensus disorder prediction 379 395 - -
Gma12g01809 689 PIRSF Condensin_H 561 681 IPR022816 GO:0000796|GO:0007076
Gma12g01809 689 PIRSF Condensin_H 282 573 IPR022816 GO:0000796|GO:0007076
Gma12g01809 689 PIRSF Condensin_H 6 290 IPR022816 GO:0000796|GO:0007076
Gma12g01809 689 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 683 IPR022816 GO:0000796|GO:0007076
Gma12g01809 689 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 683 - -
Gma12g01809 689 Pfam Condensin complex subunit 2 565 676 IPR022816 GO:0000796|GO:0007076
Gma12g01809 689 Pfam Condensin complex subunit 2 28 532 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01809 Gma-Chr12 38700680 38705558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01809 K06676 - gmx:100777082 1345.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01809 12 38700680 38705558 Gma12g01809 12 38700680 38705558 ECH
Gma13g02748 13 42080528 42081831 Gma12g01809 12 38700680 38705558 GST
Gma12g01809 12 38700680 38705558 Gma12g00861 12 8323139 8330536 PCT
Gma12g01809 12 38700680 38705558 Gma06g02735 06 51138595 51143744 PCT
Gma12g00861 12 8323139 8330536 Gma12g01809 12 38700680 38705558 PCT
Gma06g02735 06 51138595 51143744 Gma12g01809 12 38700680 38705558 PCT