Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00861 ATGGCGAACTACCAATTCAAATCACAGAAATGGAGGGAAACCACCTCAATTCCGTTTCTCCCAAATCTCTCTGATTCCGACGTTCTCACTTCCGAACCGAACCAAAAAAACCCTATCACCGTTCCGCAAAGCAAATCCCTCCATGGCGGAAACCCTAAGCCCCAACCCCACGATGGATCAGAAGCAGAGGCTCCGCATCCTGTCCCCGACCAGCCCCTTCATCCTGGGCTCCAACGACGACAAGCTCGAACGCGCCCAGGCACGCGACGCACGCGCCACCGCCATCCGCCGCAAGAGCCTCGCCCTCAATCAGCCCCTTCAGCCCAACTCCGATCCCTGCCTCAACAAACAGCAGATCATCGACTTAAAATTAATCAGAAAAATACGTGGGAGTTGAACCTGATTGACCACCTCACAGATATCATCAAGGCGGAAGAAGAAAATGATGCGGAGACTAATTTTCAAAAGGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAAGAAGCTGAGGAAGATACTACCCTGAATGGTGTTAATATTGAAAGTGGACAAGTAGAAAGCAGGAAAGAAACGAGCAAAAAGGTCTGTGGTCTTTGGATCTCTGGACTTGACTGGTTAAACATTTTGCTTAGTTTTAAGAGTTGTTTTTGCATGCAGTTGTCACCTTTGTCAACATTGGAATCATCTTTTGAGGCACTTAATGTAAAGAAGTTCGATGCTGCATTTGTCGTGGATCCTCTCTATCGCCAAACAACAGCAAAATTCGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTCGGTGTATATGGTGACTGTAGGGTGCTCTTTGATTCACAAGAAGTTCCTGCTAAGTGTATGGCAAGCCAAAATCAATCTGATATTTCAGATACTATTGATCTTTCCTTTGCCAAAGATTGTATTGATCAAATGGTGTTGGACATGCGTGTAAAGGATGAAATTTCTCCAAGTCTCAGGACTATAGTAAACCAATTTGATGAAAGTAACAGAAGACCCGCTGATATTCAACTTCAAGGCCAGAATTCAGCTGAAGATCTTGACAATGCTGATAATAATGAAAATGGTTTTTACAGAGAAGAATATGAGAACTGCATGGCCTGGAGTGATGATCGTGATGACCAAACAGTTGTTGCCGATCCAGGTTATAATGATGCAGATCCAAGTTTTCCCAGTTACCCTCAGGACAATGATGAGCCATTTCCTTCCCCAGAAATTGATATGGATGGCAGATTTGAAAATGTTGACGGGTATTTATTTTTGAGTCTGGGTTTTAGTTCAAAACAAAATGCATGGGCAGGGCCTGATCATTGGAAGTATCGAAAATCCAAAGTCTCAGAGGTTCATCCTACTTCTGAAGATGGGTCGACCCTAAAAAGTAGACAGCCAAAGAGTAAGAGACAAACTGAAGTTGATTTAAATTTCACAAATTCTCTTGAGAAAAAAATGCTAGATACATTTTCTCCTCCCAAGAATCCCAAATTGTTACTGCTTCCTGAAAGCAGATTACCTTGCAATACAAAACTTCCTGAGGATTGTCACTATCAGCCAGAAGATCTTGTCAAGTTATTTCTTCTGTCTAATGTAAAGTGTCTCGGGAGGAAGGCAAACAGGTTCTCAGATGGATCTAGAGAACAATCCGATGAATATGAATCATTCCCTTCGTGGGATAATGGAAGTGTTTGTGGGGATGACGCTGGTGACTACGGAGGTGATCTTCATGGTGACATGGAGGACACCGACACTCTTGTTACTCAGCCTCGTCAGGTCAGTAAAATTGAAGTCCAGTATGACAAGACTTCCAAACAAGTCGATGTTCATGCACTAAAAATTACTCTTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTTAGAGGGTCAAAAAGATACCTTATCTTTCAGGAATATATTAGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACAATTAGTGACATCTCTCCTCATCTGTGCTTCATATGTCTATTGCATTTGGCAAACGAGAAAGGATTGAGCATTCAAAACTCCCCTAATTTGGATGATCTTGCCATACGGAATCAAGAAACGATGGGGACTGTTTTACTAGTGAAACACGTCCAAGAAAGCATTGAAGTGAGCAACAAGTTTGTGGTTGGAGGTTGCAAATATCAGTTTGCTTATGGTGGTTTAACACTCGTTAAGGAAATTTCAGACCTATAA 2295 0.4257 MANYQFKSQKWRETTSIPFLPNLSDSDVLTSEPNQKNPITVPQSKSLHGGNPKPQPHDGSEAEAPHPVPDQPLHPGLQRRQARTRPGTRRTRHRHPPQEPRPQSAPSAQLRSLPQQTADHRLKINQKNTWELNLIDHLTDIIKAEEENDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLNGVNIESGQVESRKETSKKVCGLWISGLDWLNILLSFKSCFCMQLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGDCRVLFDSQEVPAKCMASQNQSDISDTIDLSFAKDCIDQMVLDMRVKDEISPSLRTIVNQFDESNRRPADIQLQGQNSAEDLDNADNNENGFYREEYENCMAWSDDRDDQTVVADPGYNDADPSFPSYPQDNDEPFPSPEIDMDGRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSKVSEVHPTSEDGSTLKSRQPKSKRQTEVDLNFTNSLEKKMLDTFSPPKNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSDEYESFPSWDNGSVCGDDAGDYGGDLHGDMEDTDTLVTQPRQVSKIEVQYDKTSKQVDVHALKITLWDHVQESVKLPLEGQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNSPNLDDLAIRNQETMGTVLLVKHVQESIEVSNKFVVGGCKYQFAYGGLTLVKEISDL 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00861 764 PANTHER CONDENSIN COMPLEX SUBUNIT 2 243 718 IPR022816 GO:0000796|GO:0007076
Gma12g00861 764 Pfam Condensin complex subunit 2 123 609 IPR022816 GO:0000796|GO:0007076
Gma12g00861 764 Pfam Condensin complex subunit 2 608 717 IPR022816 GO:0000796|GO:0007076
Gma12g00861 764 PANTHER CONDENSIN COMPLEX SUBUNIT 2 123 222 IPR022816 GO:0000796|GO:0007076
Gma12g00861 764 MobiDBLite consensus disorder prediction 475 502 - -
Gma12g00861 764 PANTHER CONDENSIN COMPLEX SUBUNIT 2 123 222 - -
Gma12g00861 764 MobiDBLite consensus disorder prediction 1 50 - -
Gma12g00861 764 MobiDBLite consensus disorder prediction 1 114 - -
Gma12g00861 764 PANTHER CONDENSIN COMPLEX SUBUNIT 2 243 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00861 Gma-Chr12 8323139 8330536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00861 K06676 - gmx:100793772 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00861 12 8323139 8330536 Gma12g00861 12 8323139 8330536 ECH
Gma12g00861 12 8323139 8330536 Gma06g02735 06 51138595 51143744 GST
Gma13g02748 13 42080528 42081831 Gma12g00861 12 8323139 8330536 PCT
Gma12g01809 12 38700680 38705558 Gma12g00861 12 8323139 8330536 PCT
Gma12g00861 12 8323139 8330536 Gma13g02748 13 42080528 42081831 PCT
Gma12g00861 12 8323139 8330536 Gma12g01809 12 38700680 38705558 PCT