Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01733 ATGGAGGTAGGAAGTGTTCTTAACTTTCTTCAGGACAGGACCATTTTAATTGTTGGAGCCACTGGCTTTCTAGCCAAAATTTTTCTGGAGAAAATATTGAGGGTTCAACCAAATGTTAAGAAGCTTTTTCTTCTTTTAAGAGCTTCGGATGCCAAATCAGCTAATTATCGATTGCAAAATGAGATCATAGCGAAGGACTTATTTATTGTGCTAAAGGAAAAATTGGGTGCAAATTTTAAGTCCTTTATTTCGGAAAAAGTGACTCTGGTGCCGGGGGATATTTCTTACGAGGACTTGGGTTTAACTGATTCCATTCTAAGGGAAGAGATTTGCAACCAGACAGATGTTATTGTCAATTTGGCAGCTACAACTAAGTTTGATGAAAGGTACGATTTAGCGTTGGGTCTAAATATCTTTGGAGTTAAGCATGTCATGAAGTTTGCTAAACAATGTGCTAAACTCAAAATTCTTCTTCATGTATCAACAGCTTATGTATGTGGTGAGAGAGGTGGACTCATACTAGAAGACCCCTATCACTTTGGTGATTCACTAAATGGAGTGTCTGGACTAGACATCGAAGCAGAAAGGACAATAGTGTGTGACAAATTGGATGAACTACGAGAGCAAGGGGCTACAGAGCGTGAAATTGAAATAGCTATGAAGAACCTGGGTATTAGCAGGGCAAAGGTGTATGGATGGCCAAACACATATGTATTTACGAAGGCAGTAGGAGAGATGCTTGTGGAACAATTAAAAGGAAGCCTATCCGTTGTTATTATGCGTCCCACCATCGTTACAAGCACATTAAGAGAACCTTTCCCTGGTTGGGCTGAGGGTGTAAGAACCATTGACAGTTTAGCTGTTACTTATGGGAAAGGAAAATTAAAATGCTTCCTTGGAAATATAAACGGAGTTGTGGATGTGGTACCAGCTGACATGGTGGTGAATGCAATGCTAGTGGCCATGGTGGCTCATGCAAAGCAGCCAAGTGATATTGTATATCATGTGGGTTCCTCTCTTAGAAATCCACTCACATACTTGAATCTCCAAGACTATGGACTAAAATATTTCACGGCAAAACCATGGATAAACAAGGATGGAACACCGGTCAAGGTTGGCAGAGTAACTGTATTAACCGACATGGATAGCTTTCAGAGATATATGTTCATTCGCTACCTACTTCCACTAAAGGGACTTGAGCTGGCCAATACTGCACTTTGCCAGTATTTTCGAGGAACTTATCTTGAGCTCCACAGGAAGATCCAGGTTGTGATGCGGATGGTTGAACTTTACAGGCCTTACATGTTCTTCGATGGCGTATTTGATGATATGAACACAGAGAAGTTGCGAATGGCAGCAAAACAAAGTGGGACAGAGACAGATTTGTTTTACTTTGATACGAAAGAGGTTAATTGGGATGATTACTTTATGAAGACCCATCTCCCTGGTATTGTCAAGTACATTTTCAAGTGA 1473 0.406 MEVGSVLNFLQDRTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQNEIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLTDSILREEICNQTDVIVNLAATTKFDERYDLALGLNIFGVKHVMKFAKQCAKLKILLHVSTAYVCGERGGLILEDPYHFGDSLNGVSGLDIEAERTIVCDKLDELREQGATEREIEIAMKNLGISRAKVYGWPNTYVFTKAVGEMLVEQLKGSLSVVIMRPTIVTSTLREPFPGWAEGVRTIDSLAVTYGKGKLKCFLGNINGVVDVVPADMVVNAMLVAMVAHAKQPSDIVYHVGSSLRNPLTYLNLQDYGLKYFTAKPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHRKIQVVMRMVELYRPYMFFDGVFDDMNTEKLRMAAKQSGTETDLFYFDTKEVNWDDYFMKTHLPGIVKYIFK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01733 490 CDD FAR-N_SDR_e 13 361 - -
Gma12g01733 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Gma12g01733 490 Gene3D - 8 371 - -
Gma12g01733 490 CDD FAR_C 390 489 IPR033640 -
Gma12g01733 490 Pfam Male sterility protein 17 318 IPR013120 -
Gma12g01733 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Gma12g01733 490 Pfam Male sterility protein 392 490 IPR033640 -
Gma12g01733 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 337 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01733 Gma-Chr12 37866251 37879016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01733 110 489 Acyl Lipid Metabolism Gene Families AT4G33790 57.895 5.64e-172 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01733 K13356 - gmx:100805776 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01733 12 37866251 37879016 Gma12g01733 12 37866251 37879016 ECH
Gma13g02818 13 42724627 42731663 Gma12g01733 12 37866251 37879016 GST
Gma12g01733 12 37866251 37879016 Gma11g01523 11 16135997 16143083 PCT
Gma11g01523 11 16135997 16143083 Gma12g01733 12 37866251 37879016 PCT