Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01523 ATGGAGTTGGGAAGCATACTCCATTTTCTTCAGGATAAGAGCATTTTGATCACTGGAGCCACCGGTTTTCTTGCCAAAGTTTTGTTGGAGAAGATATTGAGGGTCCAACCAAATGTTAAGAAGCTTTACCTTCTTTTAAGAGCTGAAGATGCCAAATCTGCTACTCATCGCTTGCACAATGAGATCATAGGGAAGGATTTGTTTAGGGTACTAAAGGAGAAATTGGGTGCAAATTTTAATTCCTTTGTCTCGAAAAAGTTGACTCTGGTACCTGGGGACATTTCTCGTGAGGACTTGGGATTGGAGGATTCCATTCTAAGGGAAGAGATTTATGATCAAACAGATGTCATTATTAACTTAgCTGCAACAACTAACTTTGATGAAAGGTATGATATATCGTTGGGCCTAAATACCTTTGGTGTTAAGTATGTCATCAACTTCGCCAAAAAATGTACCAAACTCAAGGTTCTTGTGCATGTATCAACAGCCTATGTATGTGGTGAGGGAGGCCAAGAAGGGCTCATATTAGAGAAACCATATCATTTGGGTGATTCACTTAATGGAGTGTCTGGATTAGACATTAATGCAGAAGAGAAAGTTGTGCGCGACAAATTAAGTGAGTTACAACAACTGGGGGCCACAGAAAAGGAAATTAAAGAGGTTATGAAGGACTTGGGCATTAGCAGGGCAAAGTTATATGGATGGCCAAATACATATGTATTCACCAAGGCAATGGGAGAGATGCTTGTGGAGCAACTAAAAGGAAACTTATCCGTTGTGATCATTCGTCCCAGCATTGTTACCAGCACATTAAAAGAACCTTTCCCTGGTTGGGCTGAAGGTGTAAGAACCATTGACAGTTTAGCTGTAGCTTATGGGAAAGGAAAATTAACATGCTTCCTTGGAGATCTAAAAGCAATTGTTGATGCGATTCCAGCAGACATGGTGGTGAATGCAATACTTGTGGCCATGGTGGCTCATGCAAATCGTCCTAGTGATGATGTTATATATCATATTGGTTCCTCTGTTAGAAGACCACTAAGATATGGCAAACTTCAAGAGTATGGATTTAGATATTTCACAGCAAAACCATGCATAAGTAAGGATGGAAGGCCAGTTAAGGTTGGAAAAGTTACAGTACTGAGCAATATGGATAGCTTCAGAAGATATATGTTCATTCGCTACCTGCTTGTGTTAAAGGGACTTGAGCTTGCCAATACTGCATTTTGCCAGTATTTCCAAGGAACATATCTTGATCTCAATAGGAAGATCCAGATTGTGATGCGGTTGGTGGACCTTTACAAACCTTACTTGTTCTTCAAAGCTGCATTTGATGATATGAACACAGAGAAGTTGAGAATGGCAGGAAGACAAGGTGGGGTGGAGACAGATTTGTTTTATTTTGACCCCGAACTGATTGATTGGGAAGATTACTTTCTGAACATCCATCTTCCTGGTATGGTGAAGTACATATTGAAGTGA 1482 0.4022 MELGSILHFLQDKSILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAEDAKSATHRLHNEIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINLAATTNFDERYDISLGLNTFGVKYVINFAKKCTKLKVLVHVSTAYVCGEGGQEGLILEKPYHLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYVFTKAMGEMLVEQLKGNLSVVIIRPSIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSVRRPLRYGKLQEYGFRYFTAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLDLNRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAGRQGGVETDLFYFDPELIDWEDYFLNIHLPGMVKYILK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01523 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 492 IPR026055 GO:0080019
Gma11g01523 493 PANTHER FATTY ACYL-COA REDUCTASE 2 492 - -
Gma11g01523 493 Pfam Male sterility protein 395 493 IPR033640 -
Gma11g01523 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 337 IPR036291 -
Gma11g01523 493 CDD FAR-N_SDR_e 13 364 - -
Gma11g01523 493 CDD FAR_C 417 492 IPR033640 -
Gma11g01523 493 Coils Coil 492 493 - -
Gma11g01523 493 Pfam Male sterility protein 17 320 IPR013120 -
Gma11g01523 493 Gene3D - 8 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01523 Gma-Chr11 16135997 16143083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01523 113 492 Acyl Lipid Metabolism Gene Families AT4G33790 60.263 3.47e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01523 K13356 - gmx:100787403 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02818 13 42724627 42731663 Gma11g01523 11 16135997 16143083 PCT
Gma12g01733 12 37866251 37879016 Gma11g01523 11 16135997 16143083 PCT
Gma11g01523 11 16135997 16143083 Gma13g02818 13 42724627 42731663 PCT
Gma11g01523 11 16135997 16143083 Gma12g01733 12 37866251 37879016 PCT