Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01719 ATGAACATGTCAGATATGATATCTTGTTTCAACGAGAACGCAGTGAATGTGTCACACTCCTCATGTTCTAGCTACTCAAACAACGCTTGCATATCTCCAAGTGTTACACCTTCAACTCAAAATTCAGTGTCTTCTGTCTACAAAACCACCCTCTCAAACCAAAAGCAGCTTCTGATCACAGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCAACGTAACCTTCGGCGAAGAGAACAACAACCCTTTGGCACCATCTTTCAGACTCAACACCAATTCACGCTTTTTCAGGAAAAAGAAAGGAAGCAAAATGTTGGAATCCGAAGACTCAAAAGTTGAAGTCTTCTGGGACCTCTCGAAGGCCAAGTATGACACTGGCCCTGAACCTGTTGAAGGGTTTTACGTGGCGATTCTCGTTGATGCAGAAATAGGCCTCATTCTCGGTGAAGATGTGGCCAAGAAGTTCAAAACAAGAACCCTTTTGGGCAATGTTTCGCTGTTATCACGGCGTGAGCATTGCTCGGGTAACGCCGTTTACGCAACCAAGGCTCAGTTTTGTGACACTGGAACTTGGCATGACATTTTGATCAGATGCAGTGGCGAGAATGAAGGACTCAAAGCTCCTGTTTTGTCTGTTTGCATTGACAAGAAGACGGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTCGTCGATGGGTTGCTTGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGGAATGCTGTGTTCATGTTCAGGACCAGGAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAGAAGATTGCACAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCCTATAAGAACACATGA 906 0.4492 MNMSDMISCFNENAVNVSHSSCSSYSNNACISPSVTPSTQNSVSSVYKTTLSNQKQLLITVTWCKSHSNQGLNVTFGEENNNPLAPSFRLNTNSRFFRKKKGSKMLESEDSKVEVFWDLSKAKYDTGPEPVEGFYVAILVDAEIGLILGEDVAKKFKTRTLLGNVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGNAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYAYKNT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01719 301 Pfam Plant protein of unknown function (DUF868) 38 299 IPR008586 -
Gma12g01719 301 PANTHER EXPRESSED PROTEIN 3 300 IPR008586 -
Gma12g01719 301 PANTHER DUF868 FAMILY PROTEIN 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01719 Gma-Chr12 37750514 37751922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01719 3 300 EF-hand Containing Proteins AT5G28150 39.672 3.37e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01719 - - gmx:100798692 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01719 12 37750514 37751922 Gma12g01719 12 37750514 37751922 ECH
Gma13g02831 13 42808007 42809276 Gma12g01719 12 37750514 37751922 GST
Gma12g01719 12 37750514 37751922 Gma12g00764 12 7049574 7051997 PCT
Gma12g01719 12 37750514 37751922 Gma11g01541 11 16444175 16445158 PCT
Gma12g00764 12 7049574 7051997 Gma12g01719 12 37750514 37751922 PCT
Gma11g01541 11 16444175 16445158 Gma12g01719 12 37750514 37751922 PCT