Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01541 ATGAGAGACATAGTTTCTTGCTTCAGCGAGAACGCAGTGAACGTGTCTCACTCTTCAATGTCGTGTTCTTCCTATTCAAACAACGCGTGCATCTCTCcctcctcctcctcctcctcctcctcctcTGTTGTTCCCTCCACCCAAAACTCAATCTCCAGCGTCTACAAACTAGTCCTCTCCACGCTGAAGCAAATTCTCATCACGGTCACATGGTGTAGGAGCAACTCCAACCAAGGACTCACCATAACCTTCAACGACGGCGATGACCCTCCACCACCACCCTTCAGACTCAACACCAATTCACGTCTCTTCAGAAAGAAAAAAGGCTCCAAAATCCTCGAATCTTCATCTTCTGACTCATCAACCAAGGTAGAAATCTTATGGGATCTCTCAAACGCCAAGTACGAATCAGGACCCGAACCTGTTCAGGGCTTTCACGTTCTGATCATCATCGACTCTGAAATAGGCTTGGTTCTTGGCGACACTGCTGCTGCTGAAGAAACAGTTTCCAAGAGGCAAAATTTCAAAAACAACAAAAACACTCCTTTGGCTAAGGTCTCACTGTTATCACGAAGAGAGCATTGTTCTGGGAACACGCTTTACACCACCAAGGCTCAGTTCTGTGACACTGGCACGTGGCACGATGTTATGATCAGATGCAGTGTGGAGAAGGAGAATGAAGGGTTGTTGTTCAAGTCACCGGTTTTGTGCGTGTGCATTGATAAGAAGACTGTGATTCGTGTGAAGAGGTTGCACTGGAATTTTAGGGGGAACCAGACCATTTTTGTTGATGGGTTGCTTGTGGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAACCCTTCTTCTTCTGGGTATGCGGTGTTCATGTTCAGGACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACACAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAA 984 0.4441 MRDIVSCFSENAVNVSHSSMSCSSYSNNACISPSSSSSSSSSVVPSTQNSISSVYKLVLSTLKQILITVTWCRSNSNQGLTITFNDGDDPPPPPFRLNTNSRLFRKKKGSKILESSSSDSSTKVEILWDLSNAKYESGPEPVQGFHVLIIIDSEIGLVLGDTAAAEETVSKRQNFKNNKNTPLAKVSLLSRREHCSGNTLYTTKAQFCDTGTWHDVMIRCSVEKENEGLLFKSPVLCVCIDKKTVIRVKRLHWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSSGYAVFMFRTRSGMDSRLWLEEKNAHKDKDRVEFSLLIYACKTS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01541 327 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gma11g01541 327 PANTHER DUF868 FAMILY PROTEIN 1 326 - -
Gma11g01541 327 PANTHER EXPRESSED PROTEIN 1 326 IPR008586 -
Gma11g01541 327 Pfam Plant protein of unknown function (DUF868) 46 325 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01541 Gma-Chr11 16444175 16445158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01541 1 326 EF-hand Containing Proteins AT5G28150 34.545 1.66e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01541 - - gmx:100797969 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01541 11 16444175 16445158 Gma11g01541 11 16444175 16445158 ECH
Gma12g00764 12 7049574 7051997 Gma11g01541 11 16444175 16445158 GST
Gma13g02831 13 42808007 42809276 Gma11g01541 11 16444175 16445158 PCT
Gma12g01719 12 37750514 37751922 Gma11g01541 11 16444175 16445158 PCT
Gma11g01541 11 16444175 16445158 Gma13g02831 13 42808007 42809276 PCT
Gma11g01541 11 16444175 16445158 Gma12g01719 12 37750514 37751922 PCT