Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01701 ATGGGGTCTTCTAGTTATTTCTTCACTTCCTTGCTTCTGGTTGTAGTGTTCAATCTGGCTAAAGGGCAGCCTCTGGTCCCTGCATTGTTCATATTTGGGGACTCTGTGGTTGATGTGGGAAATAATAACCACTTATACACCATTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTAAAGAATCACAATCCAACAGGGAGGTTTTGCAATGGAAAGCTTGCGTCAGATTACACAGCTGAAAACCTTGGATTTACCTCTTACCCCCCAGCTTACCTCAACTTAAAGGCCAAAGGAAACAACCTCTTAAATGGTGCCAACTTTGCCTCAGCTGCTTCTGGCTACTATGATCCCACAGCCAAGTTATACCATGCAATTCCATTGAGCCAACAGCTGGAACACTACAAAGAGTGCCAGAATATATTGGTGGGAACAGTAGGGCAGTCTAATGCTTCATCAATTATATCTGGTTCTATATATCTTATCAGTGCTGGGAACAGTGACTTTATTCAGAACTATTATATAAATCCACTGCTTTACAAGGTTTACACTGCTGATCAATTCTCAGACATTCTCTTGCAAAGCTATAATATATATGCACTTGGAGCAAGGAAGATTGGTGTGACAACATTACCTCCAATGGGTTGTTTGCCAGCAACCATCACTCTCTTTGGCTCTGATAGCAACCAATGTGTGGTTAAACTAAATAATGATGCTATTAACTTCAATAAGAAGCTAAACACCACATCTCAGAGCTTGCAAAAATCGCTTTCTGGTCTCAAATTGGCCATCCTTGATATCTACCAACCTCTCTATGACCTTGTCACTAAGTCTTCTGAAAATGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACAGGCTTGCTAGAAACATCTGTGTTGTGCAATCAGAAGTCCATAGGAACATGTGCCAATGCATCTGAGTATGTATTTTGGGATGGTTTTCACCCGTCTGAGGCTGCAAACAAGGTTTTGTCTGATGACTTGCTGGCTGCTGGCATCTCTCTCATATCCTAA 1038 0.4152 MGSSSYFFTSLLLVVVFNLAKGQPLVPALFIFGDSVVDVGNNNHLYTIVKANFPPYGRDLKNHNPTGRFCNGKLASDYTAENLGFTSYPPAYLNLKAKGNNLLNGANFASAASGYYDPTAKLYHAIPLSQQLEHYKECQNILVGTVGQSNASSIISGSIYLISAGNSDFIQNYYINPLLYKVYTADQFSDILLQSYNIYALGARKIGVTTLPPMGCLPATITLFGSDSNQCVVKLNNDAINFNKKLNTTSQSLQKSLSGLKLAILDIYQPLYDLVTKSSENGFFEARKACCGTGLLETSVLCNQKSIGTCANASEYVFWDGFHPSEAANKVLSDDLLAAGISLIS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01701 345 PANTHER GDSL-MOTIF LIPASE 9 344 - -
Gma12g01701 345 Pfam GDSL-like Lipase/Acylhydrolase 29 334 IPR001087 GO:0016788
Gma12g01701 345 PANTHER GDSL ESTERASE/LIPASE EXL3 9 344 - -
Gma12g01701 345 Gene3D SGNH hydrolase 18 341 IPR036514 -
Gma12g01701 345 CDD SGNH_plant_lipase_like 27 337 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01701 Gma-Chr12 37501960 37503599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01701 24 336 Acyl Lipid Metabolism Gene Families AT4G10950 32.710 4.03e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01701 - - gmx:100792352 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01701 12 37501960 37503599 Gma12g01701 12 37501960 37503599 ECH
Gma13g02850 13 43009734 43011679 Gma12g01701 12 37501960 37503599 GST
Gma12g01701 12 37501960 37503599 Gma11g01562 11 16721463 16723645 PCT
Gma11g01562 11 16721463 16723645 Gma12g01701 12 37501960 37503599 PCT