Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01562 ATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCTGATATCCTTGGATTTACCTCTTATCAACCAGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTATTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATACTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAA 1062 0.4077 MSSMGYSRSFLASFLLAVLLNVTNGQPLVPAIFTFGDSIVDVGNNNHQLTIVKANFPPYGRDFENHFPTGRFCNGKLATDFIADILGFTSYQPAYLNLKTKGKNLLNGANFASASSGYFELTSKLYSSIPLSKQLEYYKECQTKLVEAAGQSSASSIISDAIYLISAGTSDFVQNYYINPLLNKLYTTDQFSDTLLRCYSNFIQSLYALGARRIGVTSLPPIGCLPAVITLFGAHINECVTSLNSDAINFNEKLNTTSQNLKNMLPGLNLVVFDIYQPLYDLATKPSENGFFEARKACCGTGLIEVSILCNKKSIGTCANASEYVFWDGFHPSEAANKVLADELITSGISLIS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01562 353 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
Gma11g01562 353 CDD SGNH_plant_lipase_like 30 346 IPR035669 -
Gma11g01562 353 Gene3D SGNH hydrolase 21 348 IPR036514 -
Gma11g01562 353 SUPERFAMILY SGNH hydrolase 32 345 - -
Gma11g01562 353 PANTHER GDSL ESTERASE/LIPASE EXL3 13 352 - -
Gma11g01562 353 PANTHER GDSL-MOTIF LIPASE 13 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01562 Gma-Chr11 16721463 16723645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01562 27 344 Acyl Lipid Metabolism Gene Families AT4G10950 34.268 2.08e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01562 - - gmx:100775618 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01562 11 16721463 16723645 Gma11g01562 11 16721463 16723645 ECH
Gma13g02850 13 43009734 43011679 Gma11g01562 11 16721463 16723645 PCT
Gma12g01701 12 37501960 37503599 Gma11g01562 11 16721463 16723645 PCT
Gma11g01562 11 16721463 16723645 Gma13g02850 13 43009734 43011679 PCT
Gma11g01562 11 16721463 16723645 Gma12g01701 12 37501960 37503599 PCT