Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00882 ATGGCAGAACCCAAGGTTAAATACGATCGTCAACTCAGAATATGGGGTGAACAAGGACAGGCAGCCCTTGAGAAGTCTAGTATTTGCTTACTTAACTGTGGTCCTACTGGTTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGGTTGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGCGGGAGACCTCGGAAACAATTTTTTGGTGGATGAAGCAAGTCTTGGGAAGTCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAATGATGCAGTTAAAGCAAAATTTGTAGAAGAGTCTCCAGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTGTTGCCACTCAGCTCATGGAAAATTCAATGATAAAGCTTGACCAAATCTGCAGGGAGGTGAATGTTATGTTGATATTTGCTCGCTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTGTGAAGGAACATGCTGTGATTGAGTCAAAGCCTGAACATTTTTTGGATGATCTCCGGTTAAATAATCCTTGGCCTAAACTCAAGAGATTTGCAGATGATATTGACTTGAACGTGCAAGATCCTGTGGCTCATAAACACATACCGTATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCCAAAGCCATGGCGGTAGGCTTCCATTGACCAGAGAAGAAAAAAAGGAGTTCAAGGAGTTTCTTAAGGCTGGGATGGTGGCACAAGATGAAGATAATTATAAAGAAGCTATTGATTCAGCATTCAAAGTATTTGCTCCCCAAGGAATAAGTTTGGAGTTGCAACAGATACTAAATGATAGTTCTGCTGAAGTGGACTCTAATTCTTCAGATTTTTGGGTGTTGGTGACAGCTCTTAAGGATTTCATTGCAAATGAAGGTGGTGGGGAGGCACCCCTTGAAGGATCTATACCAGACATGACTTCTTCTACTGAGCAATATGTGAATTTGCAGAATATCTATCACGCTAAAGCTGAGGCTGACTTTCTTGTAATAGAGCGTCTAGTGAGAAGTACTTTGAAGAAGATTGGTAGAGATTCAAATAGCATTTCGAAGTCAATAATTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGGTACCGTCTAATTGAAGATGAGTTTAATTCTCCAAACCTACCTGAGTTACAGAAGTACCTCACTGATGAGGATTACAGCATTGCTGTGGGGATTTATATTTTGCTTCGTGCTGTTGACCGGTTTGCTGCTAATTACAACAGCTTTCCAGGACAGTTTGACAGTGCAATGGATGAAGATATACCTCGATTAAAGAGCACAGCAATTGGCCTACTTAATGACTTGGGATGCAATGGAGCCACTTTGGCTGAGGACCTTATCAATGAGATGTGTCGATTTGGTGCGGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGCTCATAACAAGGCAATTTGTACCTATGTCCGGAACATTCATATTCAACGGCATTGACCACAAGTCACAGCTTTTGTCACTGTAA 1572 0.4103 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEAGDLGNNFLVDEASLGKSKAKCVCSFLQELNDAVKAKFVEESPETLIETNPSFFSQFTLVVATQLMENSMIKLDQICREVNVMLIFARSYGLTGFVRISVKEHAVIESKPEHFLDDLRLNNPWPKLKRFADDIDLNVQDPVAHKHIPYVVILVKMADEWAQSHGGRLPLTREEKKEFKEFLKAGMVAQDEDNYKEAIDSAFKVFAPQGISLELQQILNDSSAEVDSNSSDFWVLVTALKDFIANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYHAKAEADFLVIERLVRSTLKKIGRDSNSISKSIIKSFCKNARKLKVCRYRLIEDEFNSPNLPELQKYLTDEDYSIAVGIYILLRAVDRFAANYNSFPGQFDSAMDEDIPRLKSTAIGLLNDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTFIFNGIDHKSQLLSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00882 523 Pfam ThiF family 8 501 IPR000594 -
Gma12g00882 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Gma12g00882 523 Gene3D - 2 277 - -
Gma12g00882 523 Gene3D - 357 523 - -
Gma12g00882 523 CDD APPBP1_RUB 7 521 - -
Gma12g00882 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 523 - -
Gma12g00882 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 523 IPR045886 -
Gma12g00882 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00882 Gma-Chr12 8666549 8679743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00882 8 157 EF-hand Containing Proteins AT2G30110 30.921 3.38e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00882 K04532 - gmx:100777973 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00882 12 8666549 8679743 Gma12g00882 12 8666549 8679743 ECH
Gma12g00882 12 8666549 8679743 Gma06g02717 06 50917074 50921627 GST