Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02717 ATGGCAGAACCCAAGGTTAAATACGATCGCCAACTCAGAATATGGGGCGAACAAGGACAGGCAGCCCTTGAGAAATCTAGTATTTGCTTACTTAACTGTGGTCCTACTGGTTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGGTTGGAAGTATTACTGTAGTCGACGGATCTAAAGTTGAAGTGGGTGACCTCGGAAACAATTTTTTGGTGGATGAAGCAAGTCTTGGGAAGTCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAATGATGCAGTTAAAGCAAAATTTGTAGAAGAGTCTCCAGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTGTTGCCACTCAGCTTGTGGAAAATTCAATGATAAAGCTTGACCGAATCTGCAGGGAGGCGAATGTTATGTTGATCTTTGCTCGCTCATATGGCCTTACAGGGTTTGTTCGAATTAGTGTGAAGGAGCATGCTGTGATTGAGTCAAAGCCTGACCATTTTTTGGATGATCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGATTTGCAGATGACATTGACTTGAATGTGCAAGATCCTGTAGCTCATAAACACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGAGGAAGGCTCCCATCAACCAGAGAAGAAAAAAAGGAGTTCAAGGAGCTTCTTAAGGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAAGCTATTGATTCAGCATTCAAAGTATTTGCTCCCCGAGGAATAAGTTTGGAGTCGCAACAGATACTAAATGATAGTTCTGCTGAAGTGGACTCTAATTCTTCAGATTTTTGGGTGTTGGTGACAGCTCTTAAGGATTTCATTGCAAATGAAGGTGGTGGGGATGCACCCCTTGAAGGATCTATACCAGACATGACTTCTTCTACTGAGCAATATGTGAATTTGCAGAATATCTATCACGCTAAAGCTGAGGCTGACTTTCTTGTAATAGAACGTCTAGTGAGAAGTACTTTGAAGAAGATTGGTCGAGATTCAAATAGCATTTCAAAGTCAACAATTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGGTACCGTCTAATTGAAGATGAGTTTAATTCTCCAAACCTACCCGAGTTACAGAAGTACCTAACTGATGAAGATTACAGCATTGCTGTGGGGATTTATATTTTGCTTCGTGCTGTTGACCGGTTTGCTGCTAATTACAACAGCTTTCCAGGACAGTTTGACAGTGCAATGGATGAGGATATACCTCGATTAAAAAGCACAGCAATTGCCCTACTTACTGACTTGGGATGCAATGGAGCCACTTTGGCTGAGGACCTTATAAATGAGATGTGTCGATTTGGTGCAGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGGTTTGA 1494 0.411 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEVGDLGNNFLVDEASLGKSKAKCVCSFLQELNDAVKAKFVEESPETLIETNPSFFSQFTLVVATQLVENSMIKLDRICREANVMLIFARSYGLTGFVRISVKEHAVIESKPDHFLDDLRLNNPWPELKRFADDIDLNVQDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMVAQDEDNYKEAIDSAFKVFAPRGISLESQQILNDSSAEVDSNSSDFWVLVTALKDFIANEGGGDAPLEGSIPDMTSSTEQYVNLQNIYHAKAEADFLVIERLVRSTLKKIGRDSNSISKSTIKSFCKNARKLKVCRYRLIEDEFNSPNLPELQKYLTDEDYSIAVGIYILLRAVDRFAANYNSFPGQFDSAMDEDIPRLKSTAIALLTDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02717 497 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 497 IPR035985 GO:0008641
Gma06g02717 497 Gene3D - 2 268 - -
Gma06g02717 497 Gene3D - 355 497 - -
Gma06g02717 497 Pfam ThiF family 8 497 IPR000594 -
Gma06g02717 497 CDD APPBP1_RUB 7 387 - -
Gma06g02717 497 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 497 - -
Gma06g02717 497 PIRSF APP-BP1 1 497 IPR030667 GO:0019781|GO:0045116
Gma06g02717 497 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 497 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02717 Gma-Chr6 50917074 50921627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02717 8 157 EF-hand Containing Proteins AT2G30110 30.921 1.57e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02717 K04532 - gmx:100793799 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02717 06 50917074 50921627 Gma06g02717 06 50917074 50921627 ECH
Gma12g00882 12 8666549 8679743 Gma06g02717 06 50917074 50921627 GST