Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00763 ATGTTTTTGGTGGTAAGAGCCTGTGGTTCTTCTTCTGCACATATTCAGCCCACTCTCACACCGCAGCGTAGTAGCATAAACGTCGTCGTTAGATGCTCCATCAGCAGCGTGCAGGAGAAAGAAGAGAAGGGCACTGAATTGGACTCTTCGGTGTCATTCCCTCTGATAAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGCCAGAGCACGTGGAACGCCGAAGGCAGGATCCAAGGAAGCTCCAATTTCTCGGTTCTCACCAAGAAGGGTGAGTCTCAGGCCGAGACTTCGCGCCAAATGCTCATCGACGACCACTTCGATGCATGCTTCGCCAGTCCTTTGGCTCGATCCAAGAGAACAGCTGAAATCATTTGGGGACCTCGCCACGAACCTATCATCCCTGACTATGATTTGAGGGAAATCGATTTGTATTCCTTTCAAGGTCTGTTGAAGCATGAAGGAAAAGAGAGATTTGGTTCTGCTTTTCGCCAATGGCAGGTGGATGCTGCAAATTTCATCATTGATGGTCATTATCCAGTTAGAGAGCTGTGGGAACGTGCTAGAAGCTGCTGGACTAGAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCCCTTGTTGCCACAGCAATTGGTTTGGGGCCCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGATTTCATCCCGAGATCTGAGGGTGGGTCTCCACATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGTAGAGAGTCAAGTAAGCGGATCATACTTATTTGTAATGGATCAACGCAAGGAAATACAGAGGATGTTTTTCCTTTTGGTGGTGATCAACCATTGAACATGCTCGGAGTCATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTAAAAGTGAATTCCATAATTAGCAGTCCTAACAAAGCTTGTGTTGGGACAGCCACGATCATCTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGAACTTTGATGTTGAAACTCTCTTCAAACAATCCGAAATGGATATATCCAATTTTCCGCCATTTCAACCTGGGTGGTTAAATAGAGTTGATGATGGATTGAGAACAACATTATGGGATCAATCTGGAAAAACCTGGCAATCCCTGTTGGATGAAATTGATGAATCGAACACAGAAGTTGTAGTTGCAGTTGGTCATCCTGCAAAGCACATAGCATTGATGGGGCACTGCCTTAATTTGACGAAAGAATGGTTGGGATCATTTCATCTCGACGCCGGGAGCGTTAGTGTTGTTGACTTCCCTGATGGACCTAAGGGGAAAGGTGTCATAAGGTGTATAAATTATACTGCACATTTGGGGAGATGGTCCATACCCATTACAAGATCAACAGAGGATGGTGAAGAGTTCTAA 1509 0.4626 MFLVVRACGSSSAHIQPTLTPQRSSINVVVRCSISSVQEKEEKGTELDSSVSFPLIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDACFASPLARSKRTAEIIWGPRHEPIIPDYDLREIDLYSFQGLLKHEGKERFGSAFRQWQVDAANFIIDGHYPVRELWERARSCWTRILAHDSRSVLVVAHNAVNQALVATAIGLGPEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGRESSKRIILICNGSTQGNTEDVFPFGGDQPLNMLGVIQSQKSAELLLDLKVNSIISSPNKACVGTATIISQVQEAADCLGADCVPRYVEMKQMGNFDVETLFKQSEMDISNFPPFQPGWLNRVDDGLRTTLWDQSGKTWQSLLDEIDESNTEVVVAVGHPAKHIALMGHCLNLTKEWLGSFHLDAGSVSVVDFPDGPKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00763 502 CDD HP_PGM_like 279 477 IPR013078 -
Gma12g00763 502 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 16 245 - -
Gma12g00763 502 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 423 502 - -
Gma12g00763 502 Gene3D - 272 489 IPR029033 -
Gma12g00763 502 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 423 502 - -
Gma12g00763 502 SUPERFAMILY Phosphoglycerate mutase-like 277 490 IPR029033 -
Gma12g00763 502 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 64 73 IPR001345 GO:0003824
Gma12g00763 502 SUPERFAMILY Phosphoglycerate mutase-like 60 256 IPR029033 -
Gma12g00763 502 CDD HP_PGM_like 61 242 IPR013078 -
Gma12g00763 502 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 16 245 - -
Gma12g00763 502 SMART PGAM_5 61 215 IPR013078 -
Gma12g00763 502 SMART PGAM_5 279 439 IPR013078 -
Gma12g00763 502 Gene3D - 60 262 IPR029033 -
Gma12g00763 502 Pfam Histidine phosphatase superfamily (branch 1) 62 243 IPR013078 -
Gma12g00763 502 Pfam Histidine phosphatase superfamily (branch 1) 280 469 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00763 Gma-Chr12 7029028 7034432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00763 K22200 - gmx:100794084 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00763 12 7029028 7034432 Gma12g00763 12 7029028 7034432 ECH
Gma12g00763 12 7029028 7034432 Gma11g01542 11 16458549 16463503 GST