Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01542 ATGATGTTTTTGGTGGTAAGACCCTGTGGTTCTTCTTCTGCACGTATTCACCATCATCATCCTACACCGCCGCGTAGTAGCAGAAACGTCGTCGTTAGATGCTCGGTGAGCAGCAGCGTGCAGGAGAAAGAAGAGAAGGGCACCGAACTGGATTGTTCGGTGTCTTTCCCTCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTTAGGCACGGGCAGAGCACGTGGAATGCCGAAGGGAGGATCCAAGGAAGCTCCAATTTCTCGGTTCTCACCAAGAAGGGCGAGTCTCAGGCCGAGACCTCGCGCCAAATGCTTATCGACGACCACTTCGATGCATGCTTCGCCAGTCCTTTGGCTCGATCCAAGAGAACCGCTGAAATCATTTGGGGGCCTCACCACGAACCTATCATTCCCGACTATGATTTCAGGGAAATCGATCTGTACTCTTTTCAAGGTCTGTTGAAGCATGAAGGGAAAGAGAGATTTGGTTCTGCTTTTCGCCAATGGCAGGTGGATGCTGCAAATTTCAACATTGATGGTCATTATCCTGTTAGAGAGCTGTGGGATCGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCCCTTGTTGCCACAGCAATTGGTTTGGGGACCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGATTTCATCCCGAGATCTGAGGGTGGGTCTCCACATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCAATTGCTGGTGGGAAATCTGGAGGTAGAGAGCCAAGTAAGCGGATCATACTTATTTGTAATGGATCAACACAAGGAAATACAGAGGATGTTTTTCCTTTTGGCGGTGATCAACCATTGAACATGCTCGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAATTCCATAATTAGCAGTCTTAACAAAGCTTGTATCGGGACAGCCACGATCATCTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGAGCTTTGATGTTGAAACTATCTTCAAACAAACTGAAACGGCAAGTAATGCTATATCCAATTTTCCACCATTTCAACCTGGGTGGTTAAATAGAGTTGATGATGGATTGAGAACAAAATTATGGGATCAATCTCGAAAAGCGTGGCAATCGCTGTTGGATGAAATATCTGATGAATCTAACCCAGAAGTTGTAGTGGCAGTTGGTCATCCTGCAATCCACATAGCTTTAATGGGGCACTGCCTTAATTTGACGAAAGAATGGTTGGGATCATTTCATCTCGACGCTGGGAGCGTTAGCCTTGTTGACTTCCCTGATGGACCTAAGGGAAAAGGTGTCATCAGGTGCTTAAATTATACTGCACATTTGGGGAGATGGTCCATACCTATTACAAGATCAACAGAGGATGGTGAAGAGTTCTAA 1530 0.4654 MMFLVVRPCGSSSARIHHHHPTPPRSSRNVVVRCSVSSSVQEKEEKGTELDCSVSFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDACFASPLARSKRTAEIIWGPHHEPIIPDYDFREIDLYSFQGLLKHEGKERFGSAFRQWQVDAANFNIDGHYPVRELWDRARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGTEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGREPSKRIILICNGSTQGNTEDVFPFGGDQPLNMLGVIQSQKSAELLLDLKVNSIISSLNKACIGTATIISQVQEAADCLGADCVPRYVEMKQMGSFDVETIFKQTETASNAISNFPPFQPGWLNRVDDGLRTKLWDQSRKAWQSLLDEISDESNPEVVVAVGHPAIHIALMGHCLNLTKEWLGSFHLDAGSVSLVDFPDGPKGKGVIRCLNYTAHLGRWSIPITRSTEDGEEF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01542 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 36 509 - -
Gma11g01542 509 SMART PGAM_5 64 218 IPR013078 -
Gma11g01542 509 SMART PGAM_5 282 446 IPR013078 -
Gma11g01542 509 CDD HP_PGM_like 64 245 IPR013078 -
Gma11g01542 509 SUPERFAMILY Phosphoglycerate mutase-like 63 259 IPR029033 -
Gma11g01542 509 Gene3D - 275 496 IPR029033 -
Gma11g01542 509 CDD HP_PGM_like 282 484 IPR013078 -
Gma11g01542 509 SUPERFAMILY Phosphoglycerate mutase-like 281 497 IPR029033 -
Gma11g01542 509 Pfam Histidine phosphatase superfamily (branch 1) 65 246 IPR013078 -
Gma11g01542 509 Pfam Histidine phosphatase superfamily (branch 1) 283 476 IPR013078 -
Gma11g01542 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 36 509 - -
Gma11g01542 509 Gene3D - 63 265 IPR029033 -
Gma11g01542 509 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 67 76 IPR001345 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01542 Gma-Chr11 16458549 16463503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01542 K22200 - gmx:100798495 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01542 11 16458549 16463503 Gma11g01542 11 16458549 16463503 ECH
Gma12g00763 12 7029028 7034432 Gma11g01542 11 16458549 16463503 GST