Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00740 ATGCAGCCAAATTTGTTTCCCTTTGGAAGCGTGCTGGGGAATCCTTTCATTTTCAATGGCGACGGCGATTTGAGCGAGGGAGGAGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGCGGAGCAATGGATTTGTCCAAGGTCGGCGAAAAAATCTTGAGCTCCGTTAGGTCCGCCAGATCTCTCGGATTGCTCCCTCCCGTTTCTGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATACAGTCTTTCTTCAAGTTCAGAAGAACTAAGTTCAATATATGGAAGCATACCTCAAGGCCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAAGAGGACTTTGATCCAATTAGGCATGTTTTAGAGCACGTTCCAGTTGAAGAAAATGAGCTGACATATTTTGAAAAACAGGCTGCCCTTAGATTGGCACAACTGGATAGAGTAGCTGAGCGTTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACATCATCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCTAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGACTGAACTTCGACGTGCTTTGGACATGCAATCAACACTTGAATCCCTTGTAGAAGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAACTCTTGGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTATTGGGAGTATGCCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACTGCCGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCTATTGTGCATGAGGATGAGGAGGGACTTTCGCAAAATAGTTGGCTCACTTACAGTGATTTATGCCTTCGAATACCTGATTCAAAGTTCAGGCAATGCTTATTACGAACATTGGCTGTTTTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCCAGCTAGAAAGAAAGGACTCAGCAGCACAAACTTCAAATAAGTGCAATGAAGAAATTTCTTGTAGTCCAGGTGAGCCTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTATGTCCAGTTCCGGAGATGTAATACATGGCTCATCTTCTAGGGAGGAATCTGCAACAGTGAGCTCACTGACTGAAACTAGTGGTTCACCATATAGTGATTCTCATGATACAATTAAGGAGGCTGGAAAGGAGGACAGTGCAACATCAAGCATTGAGTCCCCTTGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCACAGACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCACTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTACAGCCTATACTGCTAGCATTCATCAATTCTTGAAAAATTATGAAGATCTCAGCATCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGTTGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATATGCATGCTCTAAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCTCCAGATACAGTACAAATGATCAGTTTTGCAGGTCTTATTGGTGATGGAGCACCGTTGATTTCTTTATCCAGTGGTAAATCAACTAATGTCAGTGCAGTCCATTCCACTAAATCGGTCAATGTGGTTCACACTGGTGCAAGGAAGAATGGGTTTTCTCACTGGATTAAAAGTGGAAACCCTTTCCAGCAAAAATTACCAACCTCCAATGAAGGTCGTGGTTACTCACAACCTAATGGATCAGTTTGTGGTGAATTTGACGGAAGTTCAACCAATAATTTTCATGATGATAAAACACCCAGAAAGAATGATTTCAATCAAATGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTACCAAGTCGAAGTTCTCAACCCCATCATTCAAGAACTCTCTCTTCACATGGAAATGACGAAGAGAATACAACTCAAACTGGATCTTCTCTTTGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTCAAGGGAGTATGCCAATTGTTTGGAATTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACGGTCAGCAAAACACTAGTTCAACTGGAAAAAGCACAACTAGCTCTCTTAATTATCGCTTGAGAACAGCTTTATCCAGAGTAAATCAAGATTGTGAAGAGTGGATTAAGTCTCAATCGTCTTCACCAACATCTTTGGGTTCACCATTTGTACATACTGAGTTGACACCTACACACCCTCCCAATACAAATTTTGGTCACTCCTCAGGGACTTCTTTGGGTCTCAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTCGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATGTTCATCGGACTACAGTGAGACTACTGTTGCACATTAATGGATATGTTGAACGTGTTGCCAATTGTAAATGGGAAGTAAAAGAGCTCGGCATGGAGCATAACGGATATGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACACGACTTGCTCATGGAGGAATTCGTAAAGAGGTTCAAGACCTATTATTGGATTATGGGCTTGAAATTGTGGCTGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCCCTTATGTCATTAGATCTGCAGGTTTTGATCAATGGGTTACAGCATTTTGTGGCGCTGAATGTGAAGCCCAAGCTACAAATGGTTGAAACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCACGAGCACACCCGGAATACAGTAAAAGCCAGATTGTTGGACTGGTCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGACATACTGGAAAAAATTGAATGA 3387 0.4128 MQPNLFPFGSVLGNPFIFNGDGDLSEGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSIPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLTELRRALDMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEDEEGLSQNSWLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLERKDSAAQTSNKCNEEISCSPGEPQEVDSDVRACNNSMSSSGDVIHGSSSREESATVSSLTETSGSPYSDSHDTIKEAGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSSATAYTASIHQFLKNYEDLSIFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNMHALKMVLEKETWLKLPPDTVQMISFAGLIGDGAPLISLSSGKSTNVSAVHSTKSVNVVHTGARKNGFSHWIKSGNPFQQKLPTSNEGRGYSQPNGSVCGEFDGSSTNNFHDDKTPRKNDFNQMNGANSVSEDENEDLLADFIDEDSQLPSRSSQPHHSRTLSSHGNDEENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGVCQLFGIFFYFIYETFGQQNGQQNTSSTGKSTTSSLNYRLRTALSRVNQDCEEWIKSQSSSPTSLGSPFVHTELTPTHPPNTNFGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVALNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIVGLVNLVATMKGWKRKTRLDILEKIE 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00740 1128 MobiDBLite consensus disorder prediction 748 776 - -
Gma12g00740 1128 PANTHER UNCHARACTERIZED 18 1128 IPR040047 GO:0032456|GO:0042147|GO:1990745
Gma12g00740 1128 MobiDBLite consensus disorder prediction 671 733 - -
Gma12g00740 1128 Pfam Protein of unknown function C-terminus (DUF2451) 898 1128 IPR019514 -
Gma12g00740 1128 Pfam Vacuolar-sorting protein 54, of GARP complex 127 416 IPR019515 -
Gma12g00740 1128 MobiDBLite consensus disorder prediction 457 501 - -
Gma12g00740 1128 MobiDBLite consensus disorder prediction 673 707 - -
Gma12g00740 1128 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 18 1128 - -
Gma12g00740 1128 MobiDBLite consensus disorder prediction 432 451 - -
Gma12g00740 1128 MobiDBLite consensus disorder prediction 457 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00740 Gma-Chr12 6683342 6699827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00740 K23288 - gmx:100788476 2168.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00740 12 6683342 6699827 Gma12g00740 12 6683342 6699827 ECH
Gma12g00740 12 6683342 6699827 Gma11g01567 11 16810027 16828898 GST