Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01567 ATGCAGCCGAATTTGTTTCCCTTTGGAAGCGTGCTGGGGAATCCTTTCATTTTCAATGGCGACGGCGATTTGAGCGAGGGAGGAGGAGGGATCGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCCAAGGTCGGCGAAAAAATCTTGAGTTCCGTTAGGTCCGCCAGATCTCTTGGATTGCTCCCTCCCGTTTCTGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATACAGTCTTTCATCAAGTTCAGAAGAACTAAGTTCAATATATGGAAGCAGACCTCAAGGCCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAAGAGGACTTTGATCCAATTAGGCATGTTTTAGAGCACGTTCCAGTTGAAGAGAACGAGCTAACATATTTTGAAAAACAGGCTGCCCTTAGATTGGCACAACTGGATAGAGTAGCCGAGCGTTTATCTCGCCATGTTATGGAGCATCATGAAGTGATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACATCATCTATGAATGAGGTTTCAAGAGATCTGATTGTGAATTCTTATTCTAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGACTGAACTTCGACGTGCATTGGACATGCCATCAACACTTGAATCCCTTGTAGAAGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAAATCTTAGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTATTGGGAGTATGCCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACTGCCGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCTATTGTGCATGAGGTATATTGGCTTCATAGTTGTCATTTCAATTCCAGGCTTACTTACAGCGACTTATGCCTTCGAATACCTGATTCAAAGTTCAGGCAATGCTTATTACGAACATTGGCTGTTTTGTTTGACCTTATGTGTTCATACCATGAAATTATGGAATTCCAGCTAGAAAGAAAGGACTCAGCAGCACAAACTTCAAATAAGTGCAATGAAGAGATTTCCTGTAGTCCAGGTGAGACTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAATAATTCTATGTCCAGTTCCAGAGATGTAATACATGGCTCATCTTCTAGGGAGGAATCTGCAACAAAGAGCTCACTGACTGAAACCAGTGGTTCACCATATAGTGATTTTCATGATACAATTAAGGAGGCTGGAAAGGAGGACAGTGCAACATCAAGCATTGAGTCCCCTTGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCACAGACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCACTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTGCAGTCTGTACTGCTAGCATTCATCAATTCTTGAAAAATTATGAAGACCTCGGTGTCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGTTGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCCCCAGAAACAGTACATATGATCAGTTTTGCAGGACTTATTGGTGATGGAGCACCGTTGATTTCTTTATCCAGTGGTAAATCAACTAATGTCAGTGCAGTCCATTCCATTAAATCGGTGAATATGGTTCACACTGGTGCAAGGAAGAATGGGTTTTCTCACTGGATTAAAAGTGGAAACCCTTTCCAGCAAAAATTACCAACCTCCAATGAAGGTCGTGGTTACTCGCAACCTAATGGATCAGTTTGTGGTGAATTTGACGGAAGTTCAACCAATAATTTTCATGACGATAAAACACCCAGAAAGAATGATATCAATCAAATGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGATAGTCAACTACCAAGTCGAAGTTCTAAACCCCATCATTCAAGAGCTCTCTCTTCACATGTTAATGACGAAGAGAATACAACACAAACTGGATCTTCTCTCTGTCTATTAAAGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTCAAGGGAGTATGCCAATTGTTTGGATTTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACGCTAGTTCAACTGGAAAAGGCACTTCTAGCTCTCTTAACTATCGCCTGAGAACAGCTTTATCCAGAGTAAACCAAGATTGTGAAGAGTGGATTAAGTCTCAATCGTCGTCACCAACATCTTTGAGTTCACCATTTGTACATGCTGAGTTGACACCTACACACCCTCCCAATACAAATTATGGTCACTCCTCAGGGACTTCTTTGGGTCTGAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTTGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATGTTCATCGGACTACAGTGAGACTACTGTTGCACATTAATGGATATGTTGAACGTGTTGCCAATTGTAAATGGGAAGTAAAAGAGCTTGGCATGGAGCATAATGGATATGTTGATTTGATGCTGGGGGAGTTTAAGCACTATAAAACACGACTTGCTCATGGAGGAATTCGTAAAGAGGTTCAAGACCTATTATTGGATTATGGGCTTGAAATTGTGGCGGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGGGCCCTTATGTCATTAGATCTGCAGGTTTTGATCAATGGGTTACACCATTTTGTGTCGCTGAATGTGAAGCCCAAGCTACAAATGGTTGAGACTTTCATCAAGGCTTACTACCTTCCCGAGACAGAATATGTGCACTGGGCACGAGCACACCCGGAATACAGTAAAAGCCAGGTTGTTGGACTGGTCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGAGCTTCGTGTAAAGGTAACTGA 3375 0.4151 MQPNLFPFGSVLGNPFIFNGDGDLSEGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLTELRRALDMPSTLESLVEEGNYWKAFQVLSEYLQILDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEVYWLHSCHFNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMEFQLERKDSAAQTSNKCNEEISCSPGETQEVDSDVRACNNSMSSSRDVIHGSSSREESATKSSLTETSGSPYSDFHDTIKEAGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSSAAVCTASIHQFLKNYEDLGVFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPETVHMISFAGLIGDGAPLISLSSGKSTNVSAVHSIKSVNMVHTGARKNGFSHWIKSGNPFQQKLPTSNEGRGYSQPNGSVCGEFDGSSTNNFHDDKTPRKNDINQMNGANSVSEDENEDLLADFIDEDSQLPSRSSKPHHSRALSSHVNDEENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGVCQLFGFFFYFIYETFGQQNASSTGKGTSSSLNYRLRTALSRVNQDCEEWIKSQSSSPTSLSSPFVHAELTPTHPPNTNYGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSLNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQVVGLVNLVATMKGWKRKTRASCKGN 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01567 1124 Pfam Protein of unknown function C-terminus (DUF2451) 896 1117 IPR019514 -
Gma11g01567 1124 MobiDBLite consensus disorder prediction 677 709 - -
Gma11g01567 1124 MobiDBLite consensus disorder prediction 458 490 - -
Gma11g01567 1124 MobiDBLite consensus disorder prediction 750 778 - -
Gma11g01567 1124 MobiDBLite consensus disorder prediction 458 493 - -
Gma11g01567 1124 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 18 1119 - -
Gma11g01567 1124 MobiDBLite consensus disorder prediction 677 734 - -
Gma11g01567 1124 Pfam Vacuolar-sorting protein 54, of GARP complex 127 418 IPR019515 -
Gma11g01567 1124 PANTHER UNCHARACTERIZED 18 1119 IPR040047 GO:0032456|GO:0042147|GO:1990745
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01567 Gma-Chr11 16810027 16828898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01567 K23288 - gmx:100803274 2121.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01567 11 16810027 16828898 Gma11g01567 11 16810027 16828898 ECH
Gma12g00740 12 6683342 6699827 Gma11g01567 11 16810027 16828898 GST