Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00736 ATGGCTCCAAAACGTGCTGAGAAGCTAGTGGTCAGATCCACCAAGAAAGTTGTGGAATCAAGTGTGCTGGTTTCTGTTGTAGGCAAAAGACTAACCCGTGGAAAAAAAGATACTCAAACAACTGATGGAGAAGAAGAAGTAGGTAGCCAAGAGCATCTGGTGGTCATTCCTATTCAAGAAGTGACTCCTCAAGCACAAAAGGATTCACCTAACTCTGCCATCACCACAGAAAACAAAGCTGAGCAAGAGAACAATACTCAAGATGGTGGAGTCGAAAATAATCAAGAGGAAGAGGAAGAGCATGAGGAAGTGAAAGAGAAGAAGAATAAGGCCAAGACCCCAAAAGGGAAAAATGGGAAGGAGAAAAAAAGAGGGAGAAAAAAGGGTAGGAGAAGTGTTGAAGGGTACCAGAGGTATGTGTATAGGGTGTTGAAGCAAGTGCACCCTGAAATGGGAATTTCTTCCAAGTGCATGACTGTTCTGAACAACTTGATGAATGACATGTTTGAGAGGCTGGCTTTTGAGGCTTCTAAGCTGAAGGACTACACTGGACACATGACATTGTCTTCAAGGGAGATTCAAGGAGCAGTGAGGCTGGTTTTGCCAGGAGAACTTGGAAAGCATGCAATTGCTGAAGGGGTCAAAGCTGTTAACAACTACACATCCTATGATGCTTGA 678 0.4381 MAPKRAEKLVVRSTKKVVESSVLVSVVGKRLTRGKKDTQTTDGEEEVGSQEHLVVIPIQEVTPQAQKDSPNSAITTENKAEQENNTQDGGVENNQEEEEEHEEVKEKKNKAKTPKGKNGKEKKRGRKKGRRSVEGYQRYVYRVLKQVHPEMGISSKCMTVLNNLMNDMFERLAFEASKLKDYTGHMTLSSREIQGAVRLVLPGELGKHAIAEGVKAVNNYTSYDA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00736 225 Coils Coil 91 111 - -
Gma12g00736 225 Gene3D Histone, subunit A 60 223 IPR009072 GO:0046982
Gma12g00736 225 MobiDBLite consensus disorder prediction 111 131 - -
Gma12g00736 225 PRINTS Histone H2B signature 136 154 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 PRINTS Histone H2B signature 155 175 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 PRINTS Histone H2B signature 177 194 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 PRINTS Histone H2B signature 194 207 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 PRINTS Histone H2B signature 207 220 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 SUPERFAMILY Histone-fold 107 222 IPR009072 GO:0046982
Gma12g00736 225 Pfam Core histone H2A/H2B/H3/H4 81 199 IPR007125 GO:0003677
Gma12g00736 225 MobiDBLite consensus disorder prediction 62 91 - -
Gma12g00736 225 SMART h2b3 126 222 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 MobiDBLite consensus disorder prediction 28 131 - -
Gma12g00736 225 PANTHER HISTONE H2B 1 224 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma12g00736 225 MobiDBLite consensus disorder prediction 30 49 - -
Gma12g00736 225 PANTHER HISTONE H2B.2 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00736 Gma-Chr12 6645055 6645732 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00736 K11252 - gmx:100786873 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00736 12 6645055 6645732 Gma12g00736 12 6645055 6645732 ECH
Gma12g00736 12 6645055 6645732 Gma11g01570 11 16872073 16872957 GST