Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01570 ATGGCACATCCTCTCTCCAGAACTTGCCATTCACTTTTAACCCCACGTATTTACTTGGTTCCTAGGAATTTGACACTTGGTGCCACACGTCAACCTCTAGAATCCCCTGAAGATACTCAAACAACTGAGGAAGAAGAAGTAGGTAGCCAAGAGCATGTGGTGATCATTCCCATTCAAGAAGTGATTCCTCAAGAACAGAAGGTTTCACCTAATTCTGACATCACCACTGAAAACAAAGCTGAGCAAGAGAATAATACTCATCAAGATGGTGGAGTCCAAAATCAAGAGGAAGAGCAAAAGGGAGTAGTGAATGAGGAAGCCAAAGAGGAGAAGAATAAGAGTAAGACCGCAAAAGAGCAAAATGGAAAGGAGAAAAAAAGAGGGAGAAAAAAGAGAAATATTGAAGGGTACCAGAGGTATGTGTATGGGGTGTTGAAGCAAGTGCACCCTGAAATGGGAATTTCTTCCAAGTGCATGACTGCTCTGAACAACTTGATGAATGACATGTTTGAGAGGCTGACTTTTGAGGTTTCTAAGCTGACGGACTACACTGGACACATGACATTGTCTTCAAGGGAGATTCAAGGAGTAGTGAGGCTGGTTCTCCCAGGAGAGCTTGAAAAGCATGCTATTGCTGAAGGGGTCAAAGCTGTTAACAACTACACATCCTATGATGCATGA 681 0.4302 MAHPLSRTCHSLLTPRIYLVPRNLTLGATRQPLESPEDTQTTEEEEVGSQEHVVIIPIQEVIPQEQKVSPNSDITTENKAEQENNTHQDGGVQNQEEEQKGVVNEEAKEEKNKSKTAKEQNGKEKKRGRKKRNIEGYQRYVYGVLKQVHPEMGISSKCMTALNNLMNDMFERLTFEVSKLTDYTGHMTLSSREIQGVVRLVLPGELEKHAIAEGVKAVNNYTSYDA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01570 226 Coils Coil 93 113 - -
Gma11g01570 226 MobiDBLite consensus disorder prediction 29 132 - -
Gma11g01570 226 Gene3D Histone, subunit A 98 224 IPR009072 GO:0046982
Gma11g01570 226 PANTHER HISTONE H2B 60 225 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 PRINTS Histone H2B signature 208 221 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 PRINTS Histone H2B signature 156 176 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 PRINTS Histone H2B signature 137 155 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 PRINTS Histone H2B signature 178 195 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 PRINTS Histone H2B signature 195 208 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 MobiDBLite consensus disorder prediction 99 123 - -
Gma11g01570 226 SUPERFAMILY Histone-fold 108 223 IPR009072 GO:0046982
Gma11g01570 226 MobiDBLite consensus disorder prediction 64 98 - -
Gma11g01570 226 SMART h2b3 127 223 IPR000558 GO:0000786|GO:0003677|GO:0030527
Gma11g01570 226 PANTHER HISTONE H2B.2 60 225 - -
Gma11g01570 226 Pfam Core histone H2A/H2B/H3/H4 83 200 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01570 Gma-Chr11 16872073 16872957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01570 K11252 - gmx:100800255 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01570 11 16872073 16872957 Gma11g01570 11 16872073 16872957 ECH
Gma12g00736 12 6645055 6645732 Gma11g01570 11 16872073 16872957 GST