Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00669 ATGAAAGGAATTGATTTGTTCTGTTCTTCCTCTGGTTCCACAGCAGTAACTTCTAGCATGCACCATCGTTCTACGTTACAACGAAGCACCAAAAGCTTCGACCATGATCGAAGGAAAAGCCAACTTCATGTCCCTTGTTCATCCCAATTGCCCATTAATCCTAAGCCTTACTTCGAGAAGCACAGAAAGAGTTCAGCTGATAAGCAAAACTGGGACATGCGTAGAAAAAGTTCTGCTGATGTTAACGACTTTTATACTCATACTCATGCTAGTGCTGATGGTTCATCCAGAAGATATCTCTTTGGTGATGGACCATTCATTGAATGGGTGTCTGAGTCCAATAAAATCTCAGCAATGGTTCCTTCTCAACATGATGTCAAAGTGAAAGACAAGCTCGTGGTTAAGAACAGAAACGATCTTCCCACTCTTCGGTCCTCTTCTTCAGCTCGCTCCAAGGATCAGGTTGTGGTTTTGAGGGTGTCATTGCATTGCAAGGCCTGCGAAGGAAAAGTTAGAAAACATATTTCAAAAATGGAAGGAGTGACATCATTCAGCATAGACATGGAGACAAAGAAAGTGATCATCGTCGGAGACGTGACACCACTAGGGGTACTGGCAAGTGTATCCAAGGTGAAGAATGCACAGCTTTGGCCATCTTCTACATCGTCATCCTCATTATTACTGTCATCATCTTCTAGGCCAACATCTCCATGGTCGACATAA 723 0.4315 MKGIDLFCSSSGSTAVTSSMHHRSTLQRSTKSFDHDRRKSQLHVPCSSQLPINPKPYFEKHRKSSADKQNWDMRRKSSADVNDFYTHTHASADGSSRRYLFGDGPFIEWVSESNKISAMVPSQHDVKVKDKLVVKNRNDLPTLRSSSSARSKDQVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMETKKVIIVGDVTPLGVLASVSKVKNAQLWPSSTSSSSLLLSSSSRPTSPWST 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00669 240 Pfam Heavy-metal-associated domain 158 204 IPR006121 GO:0046872
Gma12g00669 240 ProSiteProfiles Heavy-metal-associated domain profile. 154 214 IPR006121 GO:0046872
Gma12g00669 240 MobiDBLite consensus disorder prediction 7 26 - -
Gma12g00669 240 Gene3D - 151 215 - -
Gma12g00669 240 MobiDBLite consensus disorder prediction 1 74 - -
Gma12g00669 240 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 230 - -
Gma12g00669 240 MobiDBLite consensus disorder prediction 27 42 - -
Gma12g00669 240 PANTHER OS08G0405700 PROTEIN 1 230 IPR044526 -
Gma12g00669 240 MobiDBLite consensus disorder prediction 56 74 - -
Gma12g00669 240 CDD HMA 157 210 IPR006121 GO:0046872
Gma12g00669 240 MobiDBLite consensus disorder prediction 218 240 - -
Gma12g00669 240 SUPERFAMILY HMA, heavy metal-associated domain 154 211 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00669 Gma-Chr12 5825163 5826742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00669 - - gmx:100789886 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00669 12 5825163 5826742 Gma12g00669 12 5825163 5826742 ECH
Gma12g00669 12 5825163 5826742 Gma11g01665 11 18059187 18062840 GST