Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01665 ATGATGATTAAACTTCTCCACCACCCTTTAACCACCAACAAGTCTTCCTACAGAAAAATGAGATATCCGTCATTCAGCCTCCTTAGAGAACACAACATTCTGTTCATAAGGGGCTTCATGATCTTGTTCCTCAGCTGCATAACCATTCAGCTTAATTTCTGTATTTCCAGCACCCCTTCTTCTCTCAAAGCACTTCCCTTGGAGGGACACTTCAGTTTTGAAGAAGCTGACCTTAAACATGCAGCCAGTGACTTTGGCAACAGGTACCAATCTCACCCCATGGCAGTGCTGCATCCAAAATCAGTTTCTGACATTGCAAACACCATAAAGCATATCTGGAACTTGGGGCCAAGTTCTCAGCTCAGTGTTGCAGCTAGAGGCCATGGCCACTCACTCCAGGGGCAAGCACAGGCCCATGGAGGAGTTGTTATCAACATGGAATCACTCAGTGTCCCAGAAATGCAGGTGCATACAGGAGAATCATCTCCTTATGTTGATGTCTCAGGAGGGGAATTGTGGATAAACATCTTGCATGAGACACTAAGGTATGGATTTACACCAAGATCATGGACAGATTACTTACATCTCACAGTTGGTGGCACTTTGTCCAATGCTGGTGTAAGTGGCCAAGCATTTAGGCATGGTCCCCAGATAAGTAATGTTCAGAAGCTGGAGATTGTTACAGGAACTGGAGAAGTGGTAAACTGTTCTGAGGAGCAGAATGGTGAACTCTTTCACAGTGTACTTGGAGGGCTAGGTCAGTTTGGCATTATAACAAGAGCAAGAATATTCCTGGAACCAGCACCTGCTATGGTAAAATGGATCAGGGTGTTGTATGCAGATTTCACAGCATTCATTAGAGACCAAGAGAAATTAATATTTGCAGAAAAGGCCTTTGATTATGTTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAATAACTGGAGCTCATCCTTCAACCCACAAGACCCAGTTCAAGCTAGTGAGTTCAAGTCAGATGGAAGAACTCTCTTCTGCCTAGAATTGGCCAAATACTACAATCTTGAAGAAACCCTTCTAGTGAATCAGGAAGTTGAGAAACATTTGTCCCGCTTGAACTATATCCCATCAACACTTTTTCTAACGGAAGTCACATATGTAGACTTTCTAGACAGGGTGCATACCTCAGAGGTCAAGTTGCGTTCAAAAGGCTTGTGGGATGTTCCACACCCATGGCTCAATCTTTTTATACCCAAAACCAAAATACACCATTTCGCAGAGGTTGTCTTCGGGAACATCGTTAAAGAAACAAGCAACGGCCCTGTCCTTATCTACCCAGTAAATAAATCAAAatgggacaacagaacttctgttgttattccagaggaagatattttctacttagtggcatttcttgcctctgcagtcccctcttccaatggtcctgatggccttgagcacattttgagtcggaacaaaaaaattttagagtattgtgaaagagccaatcttggggtaaagcaatatttgccccactactctacacaggaagaatggacggcgcactttggttcccaatgggagattttcaagaaaagaaaatcactttatgaccctttggctatacttgcccctggccaaggaatatttcaaaaATCAATAACCTTCTCATGA 1659 0.3526 MMIKLLHHPLTTNKSSYRKMRYPSFSLLREHNILFIRGFMILFLSCITIQLNFCISSTPSSLKALPLEGHFSFEEADLKHAASDFGNRYQSHPMAVLHPKSVSDIANTIKHIWNLGPSSQLSVAARGHGHSLQGQAQAHGGVVINMESLSVPEMQVHTGESSPYVDVSGGELWINILHETLRYGFTPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVQKLEIVTGTGEVVNCSEEQNGELFHSVLGGLGQFGIITRARIFLEPAPAMVKWIRVLYADFTAFIRDQEKLIFAEKAFDYVEGFVIINRTGLLNNWSSSFNPQDPVQASEFKSDGRTLFCLELAKYYNLEETLLVNQEVEKHLSRLNYIPSTLFLTEVTYVDFLDRVHTSEVKLRSKGLWDVPHPWLNLFIPKTKIHHFAEVVFGNIVKETSNGPVLIYPVNKSKWDNRTSVVIPEEDIFYLVAFLASAVPSSNGPDGLEHILSRNKKILEYCERANLGVKQYLPHYSTQEEWTAHFGSQWEIFKKRKSLYDPLAILAPGQGIFQKSITFS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01665 552 Gene3D - 146 270 IPR016169 -
Gma11g01665 552 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 22 549 - -
Gma11g01665 552 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 93 128 IPR006093 GO:0016491
Gma11g01665 552 ProSiteProfiles PCMH-type FAD-binding domain profile. 89 268 IPR016166 GO:0071949
Gma11g01665 552 SUPERFAMILY FAD-linked oxidases, C-terminal domain 269 545 IPR016164 GO:0003824|GO:0050660
Gma11g01665 552 SUPERFAMILY FAD-binding/transporter-associated domain-like 67 267 IPR036318 GO:0050660
Gma11g01665 552 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 269 545 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gma11g01665 552 Gene3D - 271 504 IPR016170 -
Gma11g01665 552 Gene3D - 77 545 IPR016167 -
Gma11g01665 552 PANTHER GULONOLACTONE OXIDASE 22 549 - -
Gma11g01665 552 Pfam FAD binding domain 93 237 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01665 Gma-Chr11 18059187 18062840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01665 K00279 - gmx:100797430 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00669 12 5825163 5826742 Gma11g01665 11 18059187 18062840 GST