Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00665 ATGGACACACCAAATGCACAGCCGCAAGCTGCATCAGCAAGCACGCCAAGGAAAAAAATGACAAAGCAATTGACAGGTAAAAGGGATGATACACCTTTGCACTCTGCAGCAAGAGCAGGGAATATGACTGTTCTGAAAGACACGGTTGGTGGCACTGAAGAGGGTGAACTACGTGTGTTGCTGACAAAGCAGAACCATGCCGGAGAAACGGTTCTTTATGTTGCTGCTGAATATGGTTATGTTGATATGGTTAGAGAGCTGATTCAATATTATGATCTTGCTGGGGCGGGAATTAAGGCCAGGAATGGGTTTGATGCACTCCACATTGCTGCCAAACAAGGGGATTTAGATATTGTGAAGATCTTAATGGAGGCTCATCCTGAATTGTCAATGACTGTGGATCCATCCAACACCACAGCAGTGCACACCGCTGCATTACAAGGGCATACTGAGATAGTGAAGCTTCTATTGGAAGCAGGTAGTAATCTGGCAACCATTTCTAGAAGTAATGGGAAAACAGCTTTGCATTCTGCTGCGAGAAATGGACATTTGGAGGTTGTGAAAGCGCTTCTGGGGAAGGAGCCTTCAGTTGCAACACGGACTGATAAGAAGGGACAAACAGCAATTCACATGGCAGTGAAGGGACAGAGTCTTGAGGTGGTGGAGGAGTTGATAAAAGCTGATCCCTCAACAATAAACATGGTTGATAATAAGGGTAACACAGCATTGCATATAGCAACCAGGAAGGGCAGGGCTCGGATTGTTAAGTTGCTTCTTGGGCAGACAGAAACCGATGCCTTGGTAGTTAACAGATCCGGCGAAACTGCACTAGACACAGCTGAGAAAACTGGTAACTCTGAAGTTAAAGACATTCTCCTGGAACATGGTGTCCGAAGAGCCAAAGCCATAAAGGCTCAACCAGGAACAGCCACAGCCCGAGAGTTGAAACAGACTGTGAGTGACATAAAGCATGAAGTCCACTACCAGTTGGAACACACGCGCCAAACTCGAAGAGGTGTTCAAGGCATTGCCAAACGCATCAACAAAATGCATACTGAAGGACTCAACAATGCAATAAACTCCACAACTGTGGTTGCAGTCCTCATTGCCACAGTTGCCTTTGCAGCAATCTTCACAGTCCCCGGCCAATTTGCTGATGAACCAAAAGACATCCCTGCAGGTTCAGGAATGACCATTGGTGAAGCAAACATAGCCCCACAAGCTGCATTTCTCATTTTCTTCGTCTTTGATTCCATCGCCCTCTTCATTTCTCTGGCCGTGGTGGTGGTGCAAACCTCGGTTGTGATCATAGAAAGCAAAGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTAATGTGGTTGGCTTGTGTGCTTATTTCTGTGGCCTTCTTGGCACTGTCATTTGTAGTGGTGGGGAAGGATCAGAAGTGGCTTGCAATTGGAGTCACTATCATAGGGACAACTATAATGGCCACAACTTTGGGCACCATGAGTTACTGGGTCATTAGGCATCGCATTGAGGCCTCAAACTTAAGGAGCATTCGGAAATCTTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTATCAGTTATGTCAGATTCTGAGCTACTAAACAATGACCGCAAGATATTGTATGCCATATAG 1647 0.459 MDTPNAQPQAASASTPRKKMTKQLTGKRDDTPLHSAARAGNMTVLKDTVGGTEEGELRVLLTKQNHAGETVLYVAAEYGYVDMVRELIQYYDLAGAGIKARNGFDALHIAAKQGDLDIVKILMEAHPELSMTVDPSNTTAVHTAALQGHTEIVKLLLEAGSNLATISRSNGKTALHSAARNGHLEVVKALLGKEPSVATRTDKKGQTAIHMAVKGQSLEVVEELIKADPSTINMVDNKGNTALHIATRKGRARIVKLLLGQTETDALVVNRSGETALDTAEKTGNSEVKDILLEHGVRRAKAIKAQPGTATARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADEPKDIPAGSGMTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKDQKWLAIGVTIIGTTIMATTLGTMSYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNDRKILYAI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00665 548 MobiDBLite consensus disorder prediction 1 40 - -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat profile. 136 168 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 67 96 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 238 268 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 28 59 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 170 199 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 102 131 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 136 165 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 204 234 IPR002110 GO:0005515
Gma12g00665 548 SMART ANK_2a 272 301 IPR002110 GO:0005515
Gma12g00665 548 Gene3D - 5 166 IPR036770 -
Gma12g00665 548 MobiDBLite consensus disorder prediction 1 20 - -
Gma12g00665 548 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 7 548 - -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat region circular profile. 136 163 - -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat region circular profile. 238 259 - -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat region circular profile. 102 124 - -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Gma12g00665 548 ProSiteProfiles Ankyrin repeat profile. 238 259 IPR002110 GO:0005515
Gma12g00665 548 PANTHER ANKYRIN REPEAT PLANT PROTEIN 7 548 - -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat region circular profile. 170 191 - -
Gma12g00665 548 Pfam Domain of unknown function 353 471 IPR026961 -
Gma12g00665 548 SUPERFAMILY Ankyrin repeat 32 297 IPR036770 -
Gma12g00665 548 Pfam Ankyrin repeats (3 copies) 19 90 IPR002110 GO:0005515
Gma12g00665 548 Pfam Ankyrin repeats (3 copies) 96 163 IPR002110 GO:0005515
Gma12g00665 548 Pfam Ankyrin repeats (3 copies) 167 229 IPR002110 GO:0005515
Gma12g00665 548 Pfam Ankyrin repeats (3 copies) 233 297 IPR002110 GO:0005515
Gma12g00665 548 Gene3D - 167 339 IPR036770 -
Gma12g00665 548 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00665 Gma-Chr12 5741761 5746306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00665 11 548 Miscellaneous Gene Families AT1G07710 70.818 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00665 - - gmx:100808971 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00665 12 5741761 5746306 Gma12g00665 12 5741761 5746306 ECH
Gma11g01314 11 11272422 11275902 Gma12g00665 12 5741761 5746306 ECH
Gma12g00665 12 5741761 5746306 Gma11g01314 11 11272422 11275902 GST