Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01314 ATGGACACACCAAATGCACAGCCACAAGCTGCATCAGCAAGCACGCCAAGGACGCCAAGGAAAAAAATGACTAAGCAATTGACAGGTAAAAGGGATGATACACCTTTGCACTCTGCAGCAAGAGCAGGGAATATGAGTGTTCTGAAAGACACGGTTAGTGGTAGTGAAGAGGGTGAATTGCGTGTGTTGTTGACAAAGCAGAACCATAGCGGAGAAACGATTCTTTTTGTTGCTGCTGAATATGGTTATGTTGAAATGGTTAGGGAGCTGATTCAATATTATGATCCTGCTGGTGCTGGAATTAAGGCCAGTAATGGTTTTGATGCACTTCACATTGCTGCCAAGCAAGGGGATTTAGATATTGTGAAGATCCTGATGGAGGCTCATCCTGAATTGTCAATGACTGTGGATCCATCCAACACCACAGCAGTGCACACTGCTGCATTACAAGGGCATACTGAGATAGTAAAGCTTCTATTGGAAGCAGGTAGTAATCTGGCAACCATTGCTAGAAGTAATGGGAAAACAGCTTTGCATTCTGCTGCGAGAAATGGACATTTAGAGGTTGTGAAAGCGCTATTGGGGAAGGAGCCTGTGGTTGCAACGCGGACAGATAAGAAGGGACAGACAGCACTTCACATGGCAGTGAAGGGACAGAGTCTTGAGGTGGTGGAGGAGTTGATAAAAGCTGATCCCTCAACAATAAACATGGTTGATAATAAGGGTAACACAGCATTGCATATAGCAACCAGGAAGGGCAGGGCTCAGATTATTAAGTTGCTTCTTGGGCAGACAGAAACCAATGGCTTGGTAGTTAACAAATCTGGCGAAACTGCACTAGACACAGCTGAGAAAACTGGGAATTCTGAAATTAAAGACATTCTCCTTGAACACGGTGTTCGAAGCGCCAAAGCCATAAAGGCTCAACCAGGAACAGCTACAGCCCGAGAGTTGAAACAAACTGTGAGTGACATAAAGCATGAAGTCCACTACCAGTTGGAACACACGCGCCAAACTCGAAGAGGTGTTCAAGGCATAGCCAAGCGCATCAACAAAATGCATGCTGAAGGACTCAACAATGCAATAAACTCCACAACTGTGGTTGCAGTCCTCATTGCCACAGTTGCCTTTGCAGCCATCTTCACAGTCCCTGGCCAATTTGCTGATGATCCAAAAGTCCTCCCTGCAGGAATGACCATTGGTGAAGCAAACATAGCACCGCAAGCTGCATTTCTCATTTTCTTCGTCTTTGATTCCATCGCGCTCTTCATTTCTCTGGCCGTCGTGGTGGTGCAAACCTCAGTCGTGATCATAGAAAGCAAAGCAAAGAAGCAGATGATGGCCATCATAAACAAACTAATGTGGTTGGCTTGTGTGCTTATCTCTGTGGCCTTCTTGGCACTGTCATTTGTAGTGGTGGGGAAGGACCAGAAGTGGCTTGCAATTGGAGTCACAATCATAGGGACAACTATAATGGCCACAACTTTGGGCACCATGAGTTACTGGGTCATTAGGCATCGCATTGAGGCCTCAAACTTAAGGAGCATTCGGAAATCTTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTGTCTGTTATGTCAGATTCTGAGCTACTAAACAATGAGCGTAAGATATTGTATGCGATATAG 1650 0.4545 MDTPNAQPQAASASTPRTPRKKMTKQLTGKRDDTPLHSAARAGNMSVLKDTVSGSEEGELRVLLTKQNHSGETILFVAAEYGYVEMVRELIQYYDPAGAGIKASNGFDALHIAAKQGDLDIVKILMEAHPELSMTVDPSNTTAVHTAALQGHTEIVKLLLEAGSNLATIARSNGKTALHSAARNGHLEVVKALLGKEPVVATRTDKKGQTALHMAVKGQSLEVVEELIKADPSTINMVDNKGNTALHIATRKGRAQIIKLLLGQTETNGLVVNKSGETALDTAEKTGNSEIKDILLEHGVRSAKAIKAQPGTATARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADDPKVLPAGMTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKDQKWLAIGVTIIGTTIMATTLGTMSYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNERKILYAI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01314 549 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10 549 - -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat region circular profile. 241 262 - -
Gma11g01314 549 Pfam Domain of unknown function 356 472 IPR026961 -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat profile. 139 171 IPR002110 GO:0005515
Gma11g01314 549 Gene3D - 170 343 IPR036770 -
Gma11g01314 549 SMART ANK_2a 241 274 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 275 305 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 173 202 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 31 62 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 105 134 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 207 237 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 139 168 IPR002110 GO:0005515
Gma11g01314 549 SMART ANK_2a 70 99 IPR002110 GO:0005515
Gma11g01314 549 SUPERFAMILY Ankyrin repeat 35 300 IPR036770 -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat profile. 241 262 IPR002110 GO:0005515
Gma11g01314 549 MobiDBLite consensus disorder prediction 1 45 - -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat profile. 173 205 IPR002110 GO:0005515
Gma11g01314 549 ProSiteProfiles Ankyrin repeat region circular profile. 207 229 - -
Gma11g01314 549 Gene3D - 6 169 IPR036770 -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat region circular profile. 105 127 - -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat region circular profile. 173 194 - -
Gma11g01314 549 PANTHER ANKYRIN REPEAT PLANT PROTEIN 10 549 - -
Gma11g01314 549 MobiDBLite consensus disorder prediction 1 22 - -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat region circular profile. 139 166 - -
Gma11g01314 549 ProSiteProfiles Ankyrin repeat profile. 207 229 IPR002110 GO:0005515
Gma11g01314 549 Pfam Ankyrin repeats (3 copies) 171 232 IPR002110 GO:0005515
Gma11g01314 549 Pfam Ankyrin repeats (3 copies) 24 93 IPR002110 GO:0005515
Gma11g01314 549 Pfam Ankyrin repeats (3 copies) 239 300 IPR002110 GO:0005515
Gma11g01314 549 Pfam Ankyrin repeats (3 copies) 101 166 IPR002110 GO:0005515
Gma11g01314 549 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01314 Gma-Chr11 11272422 11275902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01314 19 549 Miscellaneous Gene Families AT1G07710 70.998 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01314 - - gmx:100809687 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01314 11 11272422 11275902 Gma11g01314 11 11272422 11275902 ECH
Gma11g01314 11 11272422 11275902 Gma12g00665 12 5741761 5746306 ECH
Gma12g00665 12 5741761 5746306 Gma11g01314 11 11272422 11275902 GST