Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00646 ATGGCTGCGTCGCGAATCGTGGCCCATCCTCCGCCCTATCTCCACCGTCAATCTCCGCCATCAGACGCCGCGCCTTCCCTCAACCTCACACTCCTCCCAAAACGGTACCGTAACCTCGGCATTTGCGCTTCCCTTCGCGGCGATAAGCCCCACTCCGTCGAACTGCGAGCCACCACCTCCGACGTCGTCGTTTCCCGAGATCTTCTCTCTCTTCCGCGGCCTTTGTCTTCGACTCAGTTATCTGCTTCAGTTTCCGATGGCTCTTGCCTTCGTGTTGCATATCAGGGGGTTCATGGTGCTTATAGTGAATCAGCAGCACAGAAGGCCTACCCAAATTGTGAAGCTGTGCCTTGTGAACAATTTGAAACCGCATTTGATGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTATGACCTTTTACTCCGGCACAGTTTACATATAGTAGGAGAAGTAAATTTTGCAGTTTGTCACTGTTTGATGGCCAACCATGGTGTTAAACGTGAGGATTTAAAACGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGTGAGAACACACTGACGAAATTTGGATTGGTGCGAGAAGCAGTTGACGATACTGCTGGCGCTGCTAAGGTACTTTGA 669 0.5022 MAASRIVAHPPPYLHRQSPPSDAAPSLNLTLLPKRYRNLGICASLRGDKPHSVELRATTSDVVVSRDLLSLPRPLSSTQLSASVSDGSCLRVAYQGVHGAYSESAAQKAYPNCEAVPCEQFETAFDAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVNFAVCHCLMANHGVKREDLKRVLSHPQALAQCENTLTKFGLVREAVDDTAGAAKVL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00646 222 Gene3D - 86 174 - -
Gma12g00646 222 MobiDBLite consensus disorder prediction 1 25 - -
Gma12g00646 222 ProSiteProfiles Prephenate dehydratase domain profile. 91 222 IPR001086 GO:0004664|GO:0009094
Gma12g00646 222 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 32 221 - -
Gma12g00646 222 SUPERFAMILY Periplasmic binding protein-like II 91 221 - -
Gma12g00646 222 CDD PBP2_Ct-PDT_like 91 220 - -
Gma12g00646 222 PANTHER AROGENATE DEHYDRATASE 32 221 - -
Gma12g00646 222 Gene3D - 175 222 - -
Gma12g00646 222 Pfam Prephenate dehydratase 92 220 IPR001086 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00646 Gma-Chr12 5422103 5427346 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00646 K05359 - gmx:100787759 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00646 12 5422103 5427346 Gma12g00646 12 5422103 5427346 ECH
Gma12g00646 12 5422103 5427346 Gma11g01338 11 11598219 11603345 GST