Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01338 ATGGCGGCATCGCGAATCGTGGCCCATCCTCCGCCCTATCCCCACCGTCAATCTCCGCCGTCAGATGCCCCGCCGTCCCTCAACCTCACACTTAATCCAAAACGGTACCGTAACCTCGGCATTCGCGCCTCCCTTCGCGGCCACGAGGAGAAGAACAAGAACGATCTCGCCGATAAACCCCACTCCGTCGAGTTGCGAGCCACCAGCACCCCCGACGACGTCGTTTCCCGAGATCTGCTCTCTCTTCCGCGGCCTTTGTCTTCGACTCAGTTATCTGCTTCGGTGTCCGATAGCTCTCGCCTTCGTGTTGCATATCAGGGGGTTCGTGGTGCTTATAGTGAATCAGCAGCACAGAAGGCCTACCCAAATTGTGAAGCTGTGCCTTGTGAGCAATTCGACACCGCATTTGATGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCTATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTATGACCTTTTACTCCGGCACAGTTTACATATAGTAGGAGAAGTAAATTTTGCAGTTCGACACTGTTTGATGGCCAACCATGGTGTTAAACGTGAGGATTTAAAACGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGTGAGAACACACTGACAAAATTTGGATTGGTGCGAGAAGCAGTTGATGATACGGCTGGTGCTGCTAAGCATGTTGCCTACCACAAACTACAAGATGCAGGAGCAGTTGCTAGTTCTGCTGCCGCAAAGATCTATGGCTTGAATATACTTGATCAAGACATTCAGGATGATAGTGATAATGTCACCCGATTTTTAATGTTAGCACGAGAACCTATGATTCCTGGCACTGATAGGCGATTTAAGGTACTTTGA 876 0.4954 MAASRIVAHPPPYPHRQSPPSDAPPSLNLTLNPKRYRNLGIRASLRGHEEKNKNDLADKPHSVELRATSTPDDVVSRDLLSLPRPLSSTQLSASVSDSSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCEQFDTAFDAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVNFAVRHCLMANHGVKREDLKRVLSHPQALAQCENTLTKFGLVREAVDDTAGAAKHVAYHKLQDAGAVASSAAAKIYGLNILDQDIQDDSDNVTRFLMLAREPMIPGTDRRFKVL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01338 291 CDD PBP2_Ct-PDT_like 102 279 - -
Gma11g01338 291 SUPERFAMILY Periplasmic binding protein-like II 102 283 - -
Gma11g01338 291 PANTHER AROGENATE DEHYDRATASE 32 290 - -
Gma11g01338 291 ProSitePatterns Prephenate dehydratase signature 1. 253 275 IPR018528 GO:0004664|GO:0009094
Gma11g01338 291 Gene3D - 96 185 - -
Gma11g01338 291 Gene3D - 186 265 - -
Gma11g01338 291 ProSiteProfiles Prephenate dehydratase domain profile. 102 277 IPR001086 GO:0004664|GO:0009094
Gma11g01338 291 MobiDBLite consensus disorder prediction 45 70 - -
Gma11g01338 291 MobiDBLite consensus disorder prediction 45 66 - -
Gma11g01338 291 MobiDBLite consensus disorder prediction 1 32 - -
Gma11g01338 291 Pfam Prephenate dehydratase 103 279 IPR001086 GO:0004664|GO:0009094
Gma11g01338 291 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 32 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01338 Gma-Chr11 11598219 11603345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01338 K05359 - gmx:100787387 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01338 11 11598219 11603345 Gma11g01338 11 11598219 11603345 ECH
Gma12g00646 12 5422103 5427346 Gma11g01338 11 11598219 11603345 GST