Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00602 ATGAATGTTTCTACGCAAGGACTGCTTATCCTCAACGCTCGCTTCTCTTCCAATTTCTCCTTCCGAGGGTTTCTCAGGTTGTCGGTTTTTCCACCTTCGCAACAGTGTGAAGGGCCGAGAAGGGGTTTCTCTAAAAACATGTCTTGCAGTGTCAGTGTGGATAATTCTGATATGGTTCATCCAGCCACAGATGCTTATGCTGGAGAGGCAGTTGAAGCTTTGAAAGCTGGCTCATTGGAAGCAGTTAACAGAATTTACGAGATTAAAGGCCGTAGACATACAAGCCCTCTGGCTATTTGTGTTGGTGACGTATCAGATATAGCCCGTTTTGCTGTCACTGACCATTTACCTCATGGTCTGCTTGATTGCCTCCTACCTGGGCCTGTTATAGTTGTACTAAAACGTGGAGTCAAGATCATTGCCTGTGGTTCAGGAACTGCCCTAGCCCTTACCAGTGCAAACCTAAGTGGCCAGTCAAGTTCAACGGTTGTGGACCTCACCACACCACACAAATACAAAATACTTAGACCTGGAAGTGCAAAGGAAGAGACAGTTGCCATCTTGGAGAAGCATTCTTTGGTTGAGGCAGAGACCTCTTAA 600 0.4633 MNVSTQGLLILNARFSSNFSFRGFLRLSVFPPSQQCEGPRRGFSKNMSCSVSVDNSDMVHPATDAYAGEAVEALKAGSLEAVNRIYEIKGRRHTSPLAICVGDVSDIARFAVTDHLPHGLLDCLLPGPVIVVLKRGVKIIACGSGTALALTSANLSGQSSSTVVDLTTPHKYKILRPGSAKEETVAILEKHSLVEAETS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00602 199 PANTHER SUA5 160 197 - -
Gma12g00602 199 Pfam Telomere recombination 76 136 IPR006070 GO:0003725
Gma12g00602 199 PANTHER SUA5 138 161 - -
Gma12g00602 199 PANTHER SUA5 18 136 - -
Gma12g00602 199 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 138 161 - -
Gma12g00602 199 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 18 136 - -
Gma12g00602 199 Gene3D DHBP synthase 52 146 - -
Gma12g00602 199 SUPERFAMILY YrdC/RibB 69 184 IPR017945 -
Gma12g00602 199 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 160 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00602 Gma-Chr12 5051191 5053880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00602 K07566 - gmx:100791087 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00602 12 5051191 5053880 Gma12g00602 12 5051191 5053880 ECH
Gma12g00602 12 5051191 5053880 Gma11g01647 11 17821474 17824004 GST