Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01647 ATGGAGCAGAGCATTGGTGGACAATCTAGCATACAATGCATATTTCTACGCAAGGACTGCTTCTCCTCAAAGCTCGCGTCTCTTCCAACTTCTCCTTCCGAGATGCCCTTTGGTCACAACCGTTGGTTTCGCAGGTTGTCGGTTTTTCCACGTTTGCAACTATGTCAAGGGCTGAGAAAGGGTTTCTCCAAAAACATGGCTTGCAGTGTCAGTGTGGATAATTGTGATACGGTTCATCCAGCAACAGATGCTTATGCTGGAGAGGCAGTTGAAGCTTTGAAAGCTGGGAAAGTCATTGCAGTACCAACTGATACACTCTATGGATTTGCTTGTGATGCTTGCTCAATGGAAGCAGTTAACAGAATTTATGAGATTAAAGGCCGTAGACATACAAGCCCAGTGGCTATTTGTGTCGGTGACGTATCAGATATAGCCCGTTTTGCTGTCACTGACCATTTACCTCATGGTCTGCTTGATTCCCTCCTACCTGGGCCTGTTACAGTTGTTCTAAAACGAGGGGATTCAAGTATTCTTGAACGATCTTTGAACCCAGGATTTGATAGTATAGGAGTTAGAGTGCCTGATTGCAATTTCATCAGGATCATTGCCCGTGGTTCAGGAACTGCCCTAGCCCTTACCAGTGCAAACCTAAGTGGCCAGCCAAGTAGTCTTTCCATCAAAGATTTTGAGAACCTCTGGGAACACTGTGCTTTTGTTTATGATGGTGGTTTGATTCCATCAAGTCGTGCAGGTTCAACAATTGTGGACCTCACCACACCACACAAATACAGAATACTTAGACCTGGAAGTGCAAAGGAAGAGACAGTTGCCATCTTGGAGAAGCATTCTTTCGTTGAGGCAGAGACCACGTAA 873 0.4536 MEQSIGGQSSIQCIFLRKDCFSSKLASLPTSPSEMPFGHNRWFRRLSVFPRLQLCQGLRKGFSKNMACSVSVDNCDTVHPATDAYAGEAVEALKAGKVIAVPTDTLYGFACDACSMEAVNRIYEIKGRRHTSPVAICVGDVSDIARFAVTDHLPHGLLDSLLPGPVTVVLKRGDSSILERSLNPGFDSIGVRVPDCNFIRIIARGSGTALALTSANLSGQPSSLSIKDFENLWEHCAFVYDGGLIPSSRAGSTIVDLTTPHKYRILRPGSAKEETVAILEKHSFVEAETT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01647 290 PANTHER SUA5 49 288 - -
Gma11g01647 290 ProSiteProfiles YrdC-like domain profile. 83 271 IPR006070 GO:0003725
Gma11g01647 290 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 49 288 - -
Gma11g01647 290 Gene3D DHBP synthase 73 282 - -
Gma11g01647 290 SUPERFAMILY YrdC/RibB 86 275 IPR017945 -
Gma11g01647 290 Pfam Telomere recombination 91 269 IPR006070 GO:0003725
Gma11g01647 290 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 87 276 IPR006070 GO:0003725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01647 Gma-Chr11 17821474 17824004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01647 K07566 - gmx:100791087 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01647 11 17821474 17824004 Gma11g01647 11 17821474 17824004 ECH
Gma12g00602 12 5051191 5053880 Gma11g01647 11 17821474 17824004 GST