Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00531 ATGGCATCAACTTCTCTCTTCAACTTCAGACTCCCTCTGTTCAACTTCAACCCACTGCACCATCGACGGATAAAGAGGCCAAAATCTCTGCTCTCCTCTCCTCGCAACAGTCCACGCCTCGTTTCTTCCATTAACGACCATTTGGCGCTCACACGTGTCACATATCCGCTTCTCCAATCTCACTCTGCTCCGAAGCGCAGATTCCACGTTGGTGTACAGAAAGAGTATTCTGATGGGGAAAGCTCTGAGTCGATTGTTTCTGACGCTACATACCAAGAGGAATTTTCCTGGTCTTCTGTAGTTCTTCCGTTTCTATTCCCCGCATTGGGTGGCTTGTTATTTGGTTATGATATTGGTGCCACCTCTGGCGCTACAATCTCACTGCAGTCACCTGAGCTTAGCGGTATATCATGGTTCAATCTTTCTGCCATTCAGCTTGGACTAGTGGTTAGTGGTTCCCTATACGGGGCTCTTCTTGGCTCGCTTGTTGCATTTGCGATAGCTGATTTCCTTGGGAGGAAGAAACAACTCATTACTGCAGCACTGTTGTATTTGTTTGGTGGTGTGATTACTGCCTATGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGATTTATGGACTTGGTATAGGTTTGGCCATGCATGGGGCTCCTTTATATATTGCGGAGACTTGCCCATCACAAATCCGTGGGACATTAGTATCATTAAAAGAACTCTTCATTGTCCTTGGGATTCTGCTTGGTTATTTTGTGGGAAGCTTTCTGATTGAGACAGTTGGAGGATGGCGGTTCATGTACGGATTTAGTGCTCCAGTTGCTGTATTAATGGGGCTTGGAATGTGGACTCTCCCCAATTCTCCACGGTGGTTGCTTCTCAGAGCAGTGCAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAACAGGCAATTGCTTCCCTGAGCAAATTAAGGGGCCGACCACCTGGTGACAAAGAATCTGAGAAGCAAATAGAAGAGACCCTTGTCTCATTGAAATCTGTCTATGCAGACCAGGAATCCGAGGGGAATTTCTTAGAGGTGTTTCAGGGTCCCAATCTGAAAGCTTTCATAATTGGTGGGGGGCTAGTCCTATTTCAACAGATAACAGGTCAACCAAGTGTTCTGTATTATGCAGGCCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCATCTGATGCTACAAAAGTTTCAGTTGTTATTGGCCTATTCAAGTTACTAATGACTTGGATTGCTGTCCTAAAAGTTGATGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCCTTTCTCTAGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGGTTTTCCACTTGTTGCTGTTGGAGCTTTACTTCTTTATGTTGGTTGCTACCAGATATCATTTGGGCCAATAAGTTGGCTAATGGTATCAGAGGTCTTCCCACTTCGCACTAGAGGCAAGGGGATTAGTCTGGCTGTTCTTACCAACTTCGCTTCAAATGCTGTTGTTACCTTTGCATTCTCCCCGCTAAAGGAGTTTCTAGGAGCTGAAAATCTTTTTCTCCTTTTTGGGGCTATTGCTACTCTATCACTTTTGTTCATTATCTTTTCTGTTCCAGAGACAAAAGGCATGAGTTTAGAAGATATAGAATCCAAAATCTTGAAGTGA 1683 0.445 MASTSLFNFRLPLFNFNPLHHRRIKRPKSLLSSPRNSPRLVSSINDHLALTRVTYPLLQSHSAPKRRFHVGVQKEYSDGESSESIVSDATYQEEFSWSSVVLPFLFPALGGLLFGYDIGATSGATISLQSPELSGISWFNLSAIQLGLVVSGSLYGALLGSLVAFAIADFLGRKKQLITAALLYLFGGVITAYAPELGVLLAGRLIYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFLIETVGGWRFMYGFSAPVAVLMGLGMWTLPNSPRWLLLRAVQGKGSFQDLKEQAIASLSKLRGRPPGDKESEKQIEETLVSLKSVYADQESEGNFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEVFPLRTRGKGISLAVLTNFASNAVVTFAFSPLKEFLGAENLFLLFGAIATLSLLFIIFSVPETKGMSLEDIESKILK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00531 560 SUPERFAMILY MFS general substrate transporter 104 555 IPR036259 -
Gma12g00531 560 ProSitePatterns Sugar transport proteins signature 1. 164 181 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g00531 560 CDD MFS_GLUT10_12_Class3_like 106 554 - -
Gma12g00531 560 PRINTS Sugar transporter signature 111 121 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00531 560 PRINTS Sugar transporter signature 201 220 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00531 560 PRINTS Sugar transporter signature 372 382 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00531 560 PRINTS Sugar transporter signature 459 480 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00531 560 PRINTS Sugar transporter signature 482 494 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00531 560 ProSitePatterns Sugar transport proteins signature 2. 206 231 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g00531 560 Pfam Sugar (and other) transporter 106 555 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma12g00531 560 Gene3D MFS general substrate transporter like domains 94 558 IPR036259 -
Gma12g00531 560 ProSiteProfiles Major facilitator superfamily (MFS) profile. 103 547 IPR020846 GO:0022857
Gma12g00531 560 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 53 560 - -
Gma12g00531 560 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 53 560 - -
Gma12g00531 560 TIGRFAM SP: MFS transporter, sugar porter (SP) family 93 554 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00531 Gma-Chr12 4412185 4417037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00531 22 560 Organic Solute Cotransporters AT5G59250 73.358 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00531 - - gmx:100809316 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00531 12 4412185 4417037 Gma12g00531 12 4412185 4417037 ECH
Gma12g00531 12 4412185 4417037 Gma11g01232 11 10493346 10496463 GST