Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01232 ATGGCATCAACAACTCTCTTCAGCTTCAGACTCTCTTTGAACCCACTGCACCATCAACAGACAACGAGGCCAAAATCTCTGCTCTCCTCTCCTCGCACCAATCCACGCCTCGTTTCTTCCATTAACAATCATTTGGCCCTCACACGTGTCACATACCCGCTTCTCCAATCTCACTCTGCTCCTAAGCGCAGATTCCACGTGTATTCTAATGGGGAAAGCTCCCAGTCGCTTGTTTCTGACGCTACATACCAAGAGGAATTTTCTTGGTCTTCTGTAATTCTTCCGTTTCTGTTCCCTGCGTTGGGTGGCTTATTATTTGGCTATGATATTGGAGCCACCTCTGGCGCTACAATTTCACTGCAGTCACCTGAGCTTAGCGGTATATCATGGTTTAAACTTTCTGCTATTCAGCTTGGACTAGTGGTTAGTGGTTCCCTATATGGGGCTCTTCTTGGCTCGCTTGTTGCATTTGCCATAGCTGATTTCCTTGGTAAGAAGAAACAACTCATTACTGCAGCACTGTTGTATTTGTTTGGTGGTGTGATTACTGCCTATGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGCTTTATGGGCTTGGTATAGGTTTGGCCATGCATGGGGCTCCTTTATATATTGCGGAGACTTGTCCATCACAAATCCGTGGGACTTTAGTATCATTAAAAGAACTCTTCATTGTCCTGGGGATTCTGGTATTGTATTGTCTTTTATGTGTCTTTTACCAACTAAAGGATTTACTGATGTGGGGACTGACCTTTTATGTTATGCAGCTGGGTTATTTTGTGGGAAGCTTTCTGATTGAGACAGTTGGGGGATGGCGGTTCATGTATGGATTTAGTGCTCCAGTTGCTGTATTAATGGGGCTTGGAATGTTGACTCTCCCCAATTCTCCACGGTGGTTGCTTCTCAGAGCAGTGCAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAAAAGGCCATTTTTTCCCTGAGCAAATTAAGGGGCCGACCACCTGGTGACAAAGAATCCGAGAGACAAGTAGAAGAAACCCTTGTCTCATTGAAGTCTGCCTATGCAGATAAGGAATCGGAGGGGAATTTCTTAGAGGTGTTTCAGGGTCCGAATCTGAAAGCTTTCATAATTGGTGGGGGACTAGTCTTATTTCAACAGATAACAGGTCAACCAAGTGTTCTGTACTATGCAGGTCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCATCCGATGCTACAAAAGTTTCGGTTGTTATTGGCCTATTCAAGTTGCTAATGACTTGGATTGCTGTCCTAAAAGTTGATGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCCTTTCTCTAGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGGTTTCCCACTTGTTGCTGTTGGAGCTTTACTTCTTTATGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTAATGGTATCAGAGGTCTTCCCACTTCGCACTAGAGGAAAGGGGATTAGTCTGGCTGTTCTTACCAACTTCGCTTCAAATGCTGTTGTCACCTTTGCATTCTCCCCGCTAAAGGAGTTTCTAGGAGCAGAAAATCTTTTTCTCCTTTTTGGGGCTATTGCTATTCTATCACTTTTGTTCATTATCTTTTCTGTCCCAGAGACAAAAGGCTTGAGTTTAGAAGATATAGAATCCAAAATCTTGAAGTGA 1737 0.4387 MASTTLFSFRLSLNPLHHQQTTRPKSLLSSPRTNPRLVSSINNHLALTRVTYPLLQSHSAPKRRFHVYSNGESSQSLVSDATYQEEFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGISWFKLSAIQLGLVVSGSLYGALLGSLVAFAIADFLGKKKQLITAALLYLFGGVITAYAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILVLYCLLCVFYQLKDLLMWGLTFYVMQLGYFVGSFLIETVGGWRFMYGFSAPVAVLMGLGMLTLPNSPRWLLLRAVQGKGSFQDLKEKAIFSLSKLRGRPPGDKESERQVEETLVSLKSAYADKESEGNFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEVFPLRTRGKGISLAVLTNFASNAVVTFAFSPLKEFLGAENLFLLFGAIAILSLLFIIFSVPETKGLSLEDIESKILK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01232 578 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 40 243 - -
Gma11g01232 578 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 265 578 - -
Gma11g01232 578 Gene3D MFS general substrate transporter like domains 87 576 IPR036259 -
Gma11g01232 578 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 40 243 - -
Gma11g01232 578 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 265 578 - -
Gma11g01232 578 Pfam Sugar (and other) transporter 98 573 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma11g01232 578 TIGRFAM SP: MFS transporter, sugar porter (SP) family 72 572 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g01232 578 SUPERFAMILY MFS general substrate transporter 86 573 IPR036259 -
Gma11g01232 578 ProSitePatterns Sugar transport proteins signature 2. 198 223 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma11g01232 578 CDD MFS_GLUT10_12_Class3_like 98 572 - -
Gma11g01232 578 PRINTS Sugar transporter signature 193 212 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g01232 578 PRINTS Sugar transporter signature 500 512 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g01232 578 PRINTS Sugar transporter signature 103 113 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g01232 578 PRINTS Sugar transporter signature 390 400 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g01232 578 PRINTS Sugar transporter signature 477 498 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g01232 578 ProSiteProfiles Major facilitator superfamily (MFS) profile. 95 565 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01232 Gma-Chr11 10493346 10496463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01232 17 578 Organic Solute Cotransporters AT5G59250 69.110 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01232 - - gmx:100800071 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01232 11 10493346 10496463 Gma11g01232 11 10493346 10496463 ECH
Gma12g00531 12 4412185 4417037 Gma11g01232 11 10493346 10496463 GST