Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00529 ATGTCGGGCGGTTTCTTTAGAGGCACATCTGCGGATCAGGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGATGAAATCGCAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTGATTAAGCCTTGGATCACCAGAAGGGTGACCGAGCTTCTTGGGTTTGAAGATGAAGTGCTTATTAACTTCATACACAGTCTTCTGGATGCAAAGGAAGTGAATGGGAAAGAAGTTCAAATACAAATTACAGGATTTATGGAAAAGAACACTGGAAAGTTCATGAAAGAGCTTTGGATGCTGCTTCTCAGTGCGCAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTCCTGAAGAAGAAGGCTGAAAGTGATCTGATTGCAAGTGAAATTCAGAGGAAAAAAGATAAGGAAGGTAGAGAGATCATGGAAGAGAGGTTGAAGAAACTGGACGGTGGATTTGATTCGAAGGATAATGATACTGCATCAGATCCAACTTTGAAGCCCAGGGATTCAGGGTACTACGAGCGGGATGGGAAGGAAACTGATAAGAGGAATGGTGTAAGAGCAAGGAGCAGGTTTTCTAGGTCTCCACATTCACCTGCAGTTTCCACTTCGCCTCATCGAGGCTCACCTTCAAGGTCAATGAGCAAATCATTTTCAAATTCTCGAAGTTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCTAGGTCTCCAGAGGCTCGAGGTCGCTCTCGTTCTTTTGAAAGGATTCGTCATTCTCCACGACGACGGTCTATTTCTCCTCACAGGCATTCACCACGACGTTCTCCTTATAGGAGGATACCTTATTCAAGAAGATCTAGATCTCCTTCTCCTGTACGACGTAGAATGCATTCTCCAGTTCATcgtagatcaccatcttttcgacgacgtagatcaccttctcttgtgcgacggcgtagaccaccttctccagtacgtcgacgtagatcaccttcccctgtgcgtcggcgtagatcaccttcccctgggcgccgacgtagatcaccttcccccgggcctcgacacagatcaccttctcccgggcctcgacacaaatcaccttctcctgggcgccatcatagatcaccATCACCTCTTGGACGACGAAGGTCACTCTCACCTAGACGACGAAGATCAGTTGTTACTCGGCATAGGTCACCTTCACTAGTACGCCGAATACCACCAACCAATGTGCGGAGAAGATCAGACTCCCCCATGCAATCCCCCTCCCCCATACGACGAAGGTATGGTAGTAGAACTCCTCCACACTCTCCATCTCCATTGCGACGTAGATCACCTATTCCTGGTAAGCAAAGATCTCCTAGTATCTCCCCACAGAGGTCTCCTCGAGATGAATGGAGTTCTCAATCTCCAATACGGCGTGTATCTCCATCTCCAATCAGGAAAAATTCTCCAAGACACAAAAGAAGTCCCTTGCCGTCTTCTATGGGGAGAACTCGGCAACCCTCTAGTCCCCTGGGGTCTACACGAAGAGATAAAAGTGGCAAAGCTTCACACTATAAATCACAAGATTCAATGTCCACACAAGAGAAGTCTCCAATTCGATCTGTATCTCCAGAAGAGAGGAGTGAGACAAGCAGTGAAGGTCGAAGTCCTCATGAGAGCCCTATGAAACAAAGAAGAGAAAAGTTGTCCAATGAAAGAAGCATGAGTCCTCTGAAGAAACAAAGAACCCAGAAACCTAGCCGTGACAGCCCAGATACAAGAGAAGAAGCAGAAGAAACATACTATTCCAGAGAAAGCAGAGATCCAAAAATGAATTCATCACAAAAGATATCAAAACATTCCCCCATCAGTAAGCGAAAAGGTTCACCTGCAAAATTTCGTCATGAGGATTTCTCTCCTGAAAGGGTGTCAGGTCATACAGCTTCTGAACATCATTATGATAACGATGATTGGAGTAAGAAAGGCCGGGAGATAAAACGTGATAAATCTTCCAGACAGGACAATGAATTTCCTGCTCAAAAGTCATCAATCAACAAAGAAACTTTTTCCAGGGAGAAGCCTCAAGAATCTTATGCTGTAGATGTTAAAAAATCAGATGACAAGGACCAATCCCGTTCAAACTATGCCAAAAGTAGTGGTCGACACCACAAATCCGAAGCCACTCAAGATTTAGTTGGAAAAGGTGATCGTGTCAATCACAGTGCTTCATATGATTCTGTTTCTGAGGATAGTGGTAAGCATAGACGGGAGGGAAAGGATAGGAAAAGGCATAAAAGGTCTGAGAAAAAGTATGCATCTTCTGATGAGGATTATAGTGATGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAGGAGAAAAGAGGAGAAGAAGCTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAAGAGAAGCGACGCAGAAGGGAAGAACGGCGTGCAGAGAAGCTGAAAATGAAGAGTAAAACAGACGATATTTCAGATGATGAGGAAGCTAAACAAATGGGTTATCATCAAAGTGATAGTGAAGATGAGCAAAAGAAGCTTGAGATTGAATTGCGGAACAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCCTTGTTAAGGAACTTGGCTTTACAAATGTTATACATTGTCCTATATTTACTGATGAATTTTATGTCAACCAGATGACCTGGTGGGAAGACCATGTGCAGACCTTTATTTTGAACTTCAATTCAGTATTTGAACGCTTGGTGTTGGAAATTTCTAAAGTAGAGACACAAAATCCAAAAGAGTCTATAGTTGAAGGGGTGACCCTCCGGAATCCAAGGCTGAGAGTCTTTGCCAAGAAGTCTGGATCATTCCCATCTTTTGGGCTAGGCAAGCCCAAAGATGATTCTTCTTCTTCAACTGAAGAAAAAGATGGCTCATCCAATTCCAACCCCTTTCGTTTGGACTTCGGAAAGATCTCTCTGATCCCAGTTCCAAGCAACACTTCTGCGCCTGGCTTTTCTTTTGGAAACCCAAGACGCAAGGACCCTTCCACAGTGTTTGTTGCTGGCGCAACGGGGCAGGCTGGTATTCGCATTGCACAAACGTTGTTAAGGGAAGGTTTTAGTGTACGTGCTGGAGTCCCCGAACTTGCTTCCGCACAAGAACTTGCTCGTCTTGCTGCTCAATACAAGATTATATCAAATGAACAGGCAAAGCGTCTGAACGCTGTGCAATCAAGCTTTGACAATGCAGACACAATAGCCAAAGCAATAGGCAATGCCAGCAAGGTGGTTGTCACCATTGGTCCCACAGAGAACGGTCCAACCACAGAGGTCTCCGCATCAGATGCCTTGCAAGTGGTTCAGGCAGCACAGCTGGCAGGAGTAGGCCATGTGGCTGTCATTTACGACGAGAGCAGCGCCGGGGCCTCAACCTACAATGTGCTGGATGGCCTCTCATCTTTCTTCAGCAACCTCTTCTCCAGGTCTCAACCGTTGACTATACAAGAGTTCTTGCAGAAAGTGATTGAAACGGATGTCAAATACACCTTCATCAAGACAAGTTTGACCGATGATTTCTCACCGGAGAGTTCCTACAATGTGGTCGTCTTAGGCGAAGGAAGCGATGGTGCAAACGACTATAAAGTAGCCAAGTCCAAGATTGCGTCGTTGGTGGCTGATGTCTTCTCCAACACAGAGGTAGCAGAAAACAAGGTTGTGAAAGTGTACTCGGATCCTGGTGCCCCCTTGAAGCGTGTAGATGAACTTTTCAGCCCTATTCCTGAGGACGGAAGAAGGAAAGCCTATGCTGAAATGCAGGAAAAAGCAAAGGCTGAGGAAGAAGCAAGAGTGGCAGCTGAAAAGGCCAATGAAGCTTCTGAATCAGCAAAGAAGTTGGAAGAAGAGGTGAAGAAGCTTTTGCAGCAAGAAGCACGGGCTGCAAGTCTGGCTCAGGAGGCCCAAGAGAAGGCAGAGGCAGCTGGGGCTTCGGTGGAAAACCTCTTGAACAAGGCAAAAGACTTTGGTGCAGGGTTTTCCTGGGAAAAGTTGAGCTCACAGATTACTACTTCAATCCAAAAGCCTGATGAGGATGAGAAACCAAAGGTGCAGCTAGCCACTGTAAGGGGACAGGCCAAGGCTCGGAATCTTGCTCCTAACAAAGCAGTGGTTAGACAAACGTCTCAGAGAAGTGCTGGTAAGCCAAAGGTGGAAAAACCAAAGCAGGCAGAGACACCAAAGGAGGTGAGGAATGTATTTGGTGGCTTGTTCAAGCAAGAGACTATCTATGTTGATGATGACTAG 4311 0.4324 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQQFLDAKEEELLKKKAESDLIASEIQRKKDKEGREIMEERLKKLDGGFDSKDNDTASDPTLKPRDSGYYERDGKETDKRNGVRARSRFSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPEARGRSRSFERIRHSPRRRSISPHRHSPRRSPYRRIPYSRRSRSPSPVRRRMHSPVHRRSPSFRRRRSPSLVRRRRPPSPVRRRRSPSPVRRRRSPSPGRRRRSPSPGPRHRSPSPGPRHKSPSPGRHHRSPSPLGRRRSLSPRRRRSVVTRHRSPSLVRRIPPTNVRRRSDSPMQSPSPIRRRYGSRTPPHSPSPLRRRSPIPGKQRSPSISPQRSPRDEWSSQSPIRRVSPSPIRKNSPRHKRSPLPSSMGRTRQPSSPLGSTRRDKSGKASHYKSQDSMSTQEKSPIRSVSPEERSETSSEGRSPHESPMKQRREKLSNERSMSPLKKQRTQKPSRDSPDTREEAEETYYSRESRDPKMNSSQKISKHSPISKRKGSPAKFRHEDFSPERVSGHTASEHHYDNDDWSKKGREIKRDKSSRQDNEFPAQKSSINKETFSREKPQESYAVDVKKSDDKDQSRSNYAKSSGRHHKSEATQDLVGKGDRVNHSASYDSVSEDSGKHRREGKDRKRHKRSEKKYASSDEDYSDDSELEDRKEAKRRRKEEKKLRKEEKRRRREEKRRRREERRAEKLKMKSKTDDISDDEEAKQMGYHQSDSEDEQKKLEIELRNKALESLKAKRGLVKELGFTNVIHCPIFTDEFYVNQMTWWEDHVQTFILNFNSVFERLVLEISKVETQNPKESIVEGVTLRNPRLRVFAKKSGSFPSFGLGKPKDDSSSSTEEKDGSSNSNPFRLDFGKISLIPVPSNTSAPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELASAQELARLAAQYKIISNEQAKRLNAVQSSFDNADTIAKAIGNASKVVVTIGPTENGPTTEVSASDALQVVQAAQLAGVGHVAVIYDESSAGASTYNVLDGLSSFFSNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFSPESSYNVVVLGEGSDGANDYKVAKSKIASLVADVFSNTEVAENKVVKVYSDPGAPLKRVDELFSPIPEDGRRKAYAEMQEKAKAEEEARVAAEKANEASESAKKLEEEVKKLLQQEARAASLAQEAQEKAEAAGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPDEDEKPKVQLATVRGQAKARNLAPNKAVVRQTSQRSAGKPKVEKPKQAETPKEVRNVFGGLFKQETIYVDDD 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00529 1436 MobiDBLite consensus disorder prediction 247 262 - -
Gma12g00529 1436 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1020 1251 IPR036291 -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 161 857 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 459 486 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 690 737 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 161 203 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 802 818 - -
Gma12g00529 1436 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 942 1436 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 297 407 - -
Gma12g00529 1436 Gene3D PWI domain 33 125 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 963 988 - -
Gma12g00529 1436 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Gma12g00529 1436 Pfam NAD(P)H-binding 1026 1234 IPR016040 -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 210 246 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 544 618 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 263 290 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 503 520 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 1401 1415 - -
Gma12g00529 1436 Gene3D - 1013 1250 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 633 679 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 819 857 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 422 436 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 1379 1419 - -
Gma12g00529 1436 MobiDBLite consensus disorder prediction 529 543 - -
Gma12g00529 1436 Coils Coil 1272 1340 - -
Gma12g00529 1436 SMART pwi_2 40 114 IPR002483 GO:0006397
Gma12g00529 1436 Pfam PWI domain 46 115 IPR002483 GO:0006397
Gma12g00529 1436 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Gma12g00529 1436 Coils Coil 789 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00529 Gma-Chr12 4388094 4399240 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00529 - K13171 gmx:100810238 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00529 12 4388094 4399240 Gma12g00529 12 4388094 4399240 ECH
Gma12g00529 12 4388094 4399240 Gma11g01230 11 10478384 10483652 GST