Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01230 ATGTCGGGCGGTTTCTTTCGAGGCACATCGGCGGATCAAGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGATGAAATCGCAGAAGTTTGCACCGGAACTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTAATTAAGCCTTGGATCACCAGAAGGGTGACCGAGCTTCTTGGGTTTGAAGATGAAGTGCTTATTAACTTCATACACGGTCTTCTGGATGCGAAGGAAGTGAATGGGAAAGAAGTTCAAATACAAATTACTGGATTTATGGAAAAAAACACTGGAAAGTTCATGAAAGAGCTTTGGATGCTGCTTCTCAGTGCGCAGAAAAATGCAAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTCCTGAAAAAGAAGGCTGAAAGTGATCGGATTGCAAGTGAAATTCAGAGGAAAACAGATAATGAAGATAGAGAGATCATGGAAGAGAGGCTGAAGAAACTGGACGGTGGATTTGATTCGAAGGATAATGATACTGCATCAGATCCAACTTTGAAGCTCAGGGATTCAGGGTACCGGGAGTGGGATGGGAAGGAAACTGACAAGAGGAATGGTGTTAGAGCAAGGAGCAGGCTTTCTAGGTCTCCACATTCACCTGCAGTTTCCATTTCGCCTCATCGAGGCTCACCTTCAAGGTCAATGAGCAAATCATTTTCAAATTCTCGAAGTTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCTAGGTCTCCAGAGGCTCAAGGTCCCTCTCTTTCTGCTGAAAGGATTCGCCGTTCTCCACGACGACGATCTATTTCTCCTCAAAGGCATTCCCCACGACGTTCTCCTCATAGGAGGATACCTTATTCAAGAAGATCTAGATCTCCTTCTCCTGAACGACGTAGAATGCATTCTCCAGTCCATCGTAGATCACCATCTTTTcgacgacgtagatcaccttctcctgttcgacgacatagatcgccttctcctgtgcgacgacgtagatcgccttctcctgtgcgacgacgtagatcgccttctcctgtgcgacgacgtagatcgccttctcctgtgcgacgacgtagatcgccttctcctgtgcgacgacgtagatcaccttctccagtgcgtcggcgtagatcaccttctccagtgcgccgacgtagatcaccttcccctgggcgccgacatagatcaccttcccctgggcgtcgacacagatcaccttctcctgGGCGCTGTCATAGATCACCATCACCTCTTGGACAACGGAGGTCACTCTCACCTAGACGACGAAGATCACTTGTTACTCGGCATAGGTCACCTTCACCAGTACGCCGAATACCGCCAACCAATGTGCAGAATAGATCAGACTCCCCCATGCAATCCCCCTCCCACATACGACAAAGGTATGGTAGTAGAACTCCTTCACTCTCTCCATCTCCATTGCAACGTAGATCACCTATTCCTAGTAAGCAAAGATCTCCCAATATCTCCCCACAGAGGTCTCCTCAAGATGAACAGAGTTCTCAATCTCCAATACGGTGTGTATCTCCATCTCCAATTAGGAAAAATTCTCCAAGACACCAAAAAAGTCCCTTGCATTCTTCTATGGGGAGAGTCAGAACAGAATCCGTGACTCGTCAACCCTCTAGTCCTCTGGGGTCGGCAATAAGAGATAAATGTGGCAAAGCTTCACACTATAAATCACAAGATTCAATGTCCACACCTGAGAAGTCTCCAATTCAATCTGTATCTCAAGAAGCAAGGAGTGAGACCAGCAGTGAAGGTCGAAGTCCTCATGAGAGCCCTATGAAACAAAGAAGAGATAAGTTGTCCAATGAAATAAACACGAATCCTCTGAAGAAACAAAGAACCCAAAGACCTAGCCGTGACAGCCCAGATACAAGAGATGAAGCAGAAGAAACGCACTATTCCAGAGAAAGCAGAGATCCAAAAATGAATTCATCACAAAAGATATCAAAACATTTCCCTGTTAGTAAGCGAAAAGGTTCACCTGCAAAATATCGTCACGAGGAGTTCTCTCCTGAAAGGGTGTCAGGTCATCCAGCTTCTGAACATCATTATGATAACAATGATTGGAGTAAGAAAGGCCAGGAGATAATGCGTGATAAATCTTCCGGAAAGGGCAATGAATTTCCTGCTCAAAAGTCATCAATGAACAAAGAAACTTTTTCCAGGGAGAAGCCTCAAGAATCTTATGCTGTAGATATTAAAAAATCAGATGTCAAGGACCAATCCCATTCAAACTATGCCAAAAGCAGTTATCGGCATCACAAATCCGAAACCACTCAAGATTTAGTTGGAAAAGGTGATCGTGTCAATCACAATGCTTCACATGATTCTGTTTCTGAGGATAGTGGTAAGCATAGACGGGAGGGAAAGGATAGGAAAAGGCATAAAAGGTCTGAGAAAAAGTATACATCTTCTGATGAGGATTATAGTGATGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAGGAGAAAAGAGGAGAagaagctgcagaaggaggagaagcgtcgaagatgtgaagagaagcgacgcagaagggaagaACGGCGTGCGGAGAAGCTGAAAATGAAGAGTAAAACAGATGATATTTCAGGTGATGAGGAGGCTAAACGAATGGATTATCATCAAAGTGATAGTGTAGTTACACCATCTGAGCAAAAGAAGCTTGAGATTGAATTGCGGAACAAGGCTCTTGAATCCCTCAAAGCAAAGAAGGGCATGAATAACTAA 2778 0.3812 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHGLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQQFLDAKEEELLKKKAESDRIASEIQRKTDNEDREIMEERLKKLDGGFDSKDNDTASDPTLKLRDSGYREWDGKETDKRNGVRARSRLSRSPHSPAVSISPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPEAQGPSLSAERIRRSPRRRSISPQRHSPRRSPHRRIPYSRRSRSPSPERRRMHSPVHRRSPSFRRRRSPSPVRRHRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPGRRHRSPSPGRRHRSPSPGRCHRSPSPLGQRRSLSPRRRRSLVTRHRSPSPVRRIPPTNVQNRSDSPMQSPSHIRQRYGSRTPSLSPSPLQRRSPIPSKQRSPNISPQRSPQDEQSSQSPIRCVSPSPIRKNSPRHQKSPLHSSMGRVRTESVTRQPSSPLGSAIRDKCGKASHYKSQDSMSTPEKSPIQSVSQEARSETSSEGRSPHESPMKQRRDKLSNEINTNPLKKQRTQRPSRDSPDTRDEAEETHYSRESRDPKMNSSQKISKHFPVSKRKGSPAKYRHEEFSPERVSGHPASEHHYDNNDWSKKGQEIMRDKSSGKGNEFPAQKSSMNKETFSREKPQESYAVDIKKSDVKDQSHSNYAKSSYRHHKSETTQDLVGKGDRVNHNASHDSVSEDSGKHRREGKDRKRHKRSEKKYTSSDEDYSDDSELEDRKEAKRRRKEEKKLQKEEKRRRCEEKRRRREERRAEKLKMKSKTDDISGDEEAKRMDYHQSDSVVTPSEQKKLEIELRNKALESLKAKKGMNN 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01230 925 Gene3D PWI domain 33 125 - -
Gma11g01230 925 Pfam PWI domain 46 115 IPR002483 GO:0006397
Gma11g01230 925 Coils Coil 827 873 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 732 802 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 271 293 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 450 557 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 597 619 - -
Gma11g01230 925 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 390 922 - -
Gma11g01230 925 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 397 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 161 902 - -
Gma11g01230 925 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Gma11g01230 925 MobiDBLite consensus disorder prediction 161 203 - -
Gma11g01230 925 Coils Coil 123 143 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 571 596 - -
Gma11g01230 925 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Gma11g01230 925 MobiDBLite consensus disorder prediction 675 717 - -
Gma11g01230 925 SMART pwi_2 40 114 IPR002483 GO:0006397
Gma11g01230 925 MobiDBLite consensus disorder prediction 429 443 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 628 660 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 305 415 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 210 257 - -
Gma11g01230 925 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 390 922 - -
Gma11g01230 925 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 397 - -
Gma11g01230 925 MobiDBLite consensus disorder prediction 830 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01230 Gma-Chr11 10478384 10483652 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01230 K13171 - gmx:100790051 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01230 11 10478384 10483652 Gma11g01230 11 10478384 10483652 ECH
Gma12g00529 12 4388094 4399240 Gma11g01230 11 10478384 10483652 GST