Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00519 ATGAGCAGTGATAGGAATATTGGGGTTGCCTTGGACTTTTCCAAAGGAAGCAAAATCGCTCTCAAATGGGCTATTGACAATCTTCTCCGCAACGGTGACATACTCTACATCGTCCACATCAAGCCTTCCGGAGGAAGTGAATTCCGAAATCTTCTCTGGTCCACCACTGGTTCACCTCTGATTCCGTTGTCGGAGTTTCGTGAGAAGGAGGTGATGCATCACTATGAGGTGGATACTGATGCTGAGGTGTTGGACTTGCTTGACACCGCTTCTAGGGAGAAACAGGTGACTGTGGTGGCAAAGCTATACTGGGGGGATGCAAGAGAGAAAATTGTGGAAGCTGTTGGGGATTTAAAGCTTGACTCTTTGGTCATGGGTAGCAGAGGATTGGGCGCCATACAGAGGGTATTGCTGGGGAGTGTGACTAATTATGTCACCACAAATGCGAGTTGCCCTATAACGATTGTGAAAGACTCTGCCCCTTCTACTAACTGA 495 0.4788 MSSDRNIGVALDFSKGSKIALKWAIDNLLRNGDILYIVHIKPSGGSEFRNLLWSTTGSPLIPLSEFREKEVMHHYEVDTDAEVLDLLDTASREKQVTVVAKLYWGDAREKIVEAVGDLKLDSLVMGSRGLGAIQRVLLGSVTNYVTTNASCPITIVKDSAPSTN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00519 164 Gene3D HUPs 2 164 IPR014729 -
Gma12g00519 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Gma12g00519 164 Pfam Universal stress protein family 5 157 IPR006016 -
Gma12g00519 164 CDD USP_Like 6 156 - -
Gma12g00519 164 PANTHER IMP2'P 1 162 - -
Gma12g00519 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Gma12g00519 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Gma12g00519 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Gma12g00519 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00519 Gma-Chr12 4335033 4336590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00519 4 48 Receptor kinase-like Gene Family AT5G35380 42.308 5.62e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00519 - - gmx:100306505 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00519 12 4335033 4336590 Gma12g00519 12 4335033 4336590 ECH
Gma12g00519 12 4335033 4336590 Gma11g01220 11 10427764 10429675 GST