Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01220 ATGAACAGTGATAGGAAAATTGGGGTTGCCTTGGACTTTTCCAAAGGAAGCAAAATCGCTCTGAAATGGGCTATTGACAATCTTATCAGCAACGGTGACACTCTCTACATCGTCCACACCAAGCCTTCCGGAGGAAGTGAATCAGGAAATCTTCTCTGGTCCACCACTGGTTCACCTCTGATTCCATTGTCGGAGTTTCGTGAAAAGGAGGTGATGCGTCACTATGAGGTGGATACTGATGCTGAGGTGTTGGACTTGCTTGACACCGCTTCTAGGCAGAAACAGGTGAATGTGGTGGCAAAGCTATACTGGGGGGATGCAAGAGAGAAAATTGTGGAAGCCGTTGGGGATTTGAAGCTTGACTCTTTGGTCATGGGTAGCAGAGGCTTGGGTGCCATACAAAGGGTATTACTGGGGAGTGTGACTAATTATGTCACCGCAAATGCGAGTTGCCCTATAACGATTGTGAAAGACTCTGCCCCTTCTACTATCTGA 495 0.4747 MNSDRKIGVALDFSKGSKIALKWAIDNLISNGDTLYIVHTKPSGGSESGNLLWSTTGSPLIPLSEFREKEVMRHYEVDTDAEVLDLLDTASRQKQVNVVAKLYWGDAREKIVEAVGDLKLDSLVMGSRGLGAIQRVLLGSVTNYVTANASCPITIVKDSAPSTI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01220 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Gma11g01220 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Gma11g01220 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Gma11g01220 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Gma11g01220 164 CDD USP_Like 6 156 - -
Gma11g01220 164 PANTHER IMP2'P 1 162 - -
Gma11g01220 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
Gma11g01220 164 Pfam Universal stress protein family 5 157 IPR006016 -
Gma11g01220 164 Gene3D HUPs 2 163 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01220 Gma-Chr11 10427764 10429675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01220 7 39 Receptor kinase-like Gene Family AT1G78940 54.545 4.67e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01220 - - gmx:100499728 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01220 11 10427764 10429675 Gma11g01220 11 10427764 10429675 ECH
Gma12g00519 12 4335033 4336590 Gma11g01220 11 10427764 10429675 GST