Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00457 ATGGGGTTGGAATCGGTGGGAGATTTAGCGATTAACGTGATTCTGAAAAAATTAGGAGCCCAAGACATTGCGAGAGTGGCGTGTGTGAGCAAAAGGTTCAGTTCTTCCGCTTCCGATGACACTCTTTGGATCAATCTCTGCTTCAATGAACTCGCTTTGACACAACCCCTCGATCATCTCGGAAACCCTCTCTCTTCCTTCAAGGAATGCTATCTAGCATGGAGAGGAGCTTTTGTTATGTACCCTTGGTCTCTTGTTAAGCGTGTAAAAAGGTGCTGGGATAGAATAAAAACCTGGTTGACCAATAATTTTCCTGAAGCGGAGGCCACTCTTTGTAAAGGTGCAACTGAAGCTGACATTCAGGAGTTGGAGAATGTATTAAAGGTGAAATTGCCTCTTCCTACAAGGATCCTTTATCGCTTTCACAATGGGCAAGAATTTGCAAAGGCAGATCCAGAAACTAGTACATTTGGCAGATCTTTGGGTCTAATTGGTGGCTACTCCTTCTATGGTCATTTGGTGAATGTTTATCTATTACCTATATGTCAGATAATCCTAGAAACTCAGCAAACTAGGCGTCGCTTGAGCTTTTTAAGAAGATCAAAGTATGTTCTTGTGGCTGCTTCATCCACATACAGTAGAAAGTTGTTTTTCCTCAACTGTACCAATGGTCAACTATATGTCGGGACCAGGTCTCCTCTTACCGAAAGAGACATAATCCCTTGTGTACCTCATGACCTGATTAGTTTACATCAGGAATTGAATAGTTCAGAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACAAGGTCGCCGTTTAGAACACGGCTTTATCAAACTTCATGATGAAGGAAATGGCAAAAGCATTAATCTTTTCCCAGAAGAACCCCATATTTGTTCAACGGCTGTTACTAATGGTGTGAAGGTTCGCGCTTCTGCACTGGTTATCCCTGAGTTGATGGATCTTCAAGATGACCTTGGAGAGTACTTATTTGCTTATTCAATCCGCTTGTCCCTTGAACCTCAAGGATGCATTATTAATGGAATGTCCTTCAGCTCTTGCCAGCTCCATTGGAGGCACTGGATCATCCGTGCTAATGATATTGTTATATCTGATGTCAATGGAAAAGCTGTTATAGGACAGtttccacttttgcgtccgggtgctcaagaatttgtttatcagagttgcacgcctctaccaacaccatcaggttctattgaaggttcttttacatttatacccggcagATTGGCAGACCCAAAAGGAGACCCTTTTCTAGCTACAGTGGCTCGTTTCCCGCTCCAGCTGCCAGACTATATATTCTGA 1332 0.3941 MGLESVGDLAINVILKKLGAQDIARVACVSKRFSSSASDDTLWINLCFNELALTQPLDHLGNPLSSFKECYLAWRGAFVMYPWSLVKRVKRCWDRIKTWLTNNFPEAEATLCKGATEADIQELENVLKVKLPLPTRILYRFHNGQEFAKADPETSTFGRSLGLIGGYSFYGHLVNVYLLPICQIILETQQTRRRLSFLRRSKYVLVAASSTYSRKLFFLNCTNGQLYVGTRSPLTERDIIPCVPHDLISLHQELNSSEQQDAMLLWLEEQGRRLEHGFIKLHDEGNGKSINLFPEEPHICSTAVTNGVKVRASALVIPELMDLQDDLGEYLFAYSIRLSLEPQGCIINGMSFSSCQLHWRHWIIRANDIVISDVNGKAVIGQFPLLRPGAQEFVYQSCTPLPTPSGSIEGSFTFIPGRLADPKGDPFLATVARFPLQLPDYIF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00457 443 Gene3D - 8 99 - -
Gma12g00457 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Gma12g00457 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Gma12g00457 443 Gene3D ApaG domain 299 443 IPR036767 -
Gma12g00457 443 Pfam ApaG domain 324 415 IPR007474 -
Gma12g00457 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Gma12g00457 443 SUPERFAMILY F-box domain 13 73 IPR036047 GO:0005515
Gma12g00457 443 SUPERFAMILY SMI1/KNR4-like 92 196 IPR037883 -
Gma12g00457 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Gma12g00457 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00457 Gma-Chr12 3745610 3749929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00457 K10290 - gmx:100809876 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00457 12 3745610 3749929 Gma12g00457 12 3745610 3749929 ECH
Gma12g00457 12 3745610 3749929 Gma11g01156 11 9743968 9747985 GST