Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01156 ATGGGGTTGGAATCGGTGGGAGATTTAGCGATTCACGTGATTCTCAGTAAGTTAGGAGCCCAAGACACTGCCAGAGTCGCGTGTGTGAGCAAAAGGTTCTGTTCTTCCGCTTCCGACGACACTCTCTGGATCAATCACTGCTTCCACGAACTCGCTCTGACACAACCCCTCGATCATCTCGGAAACCCTCTCTCTTCCTTCAAGGAATGCTATCAAGCATGGCGAGGAGCTTTTGTTATGTATCCTTGGTCTCTTGTTAAGCGTGTAAAAAGGTGCTGGGATAAAATAAAAACCTGGTTGACCAATAATTTTCCTGAAGCTGAGGCCACTCTTTGTAAAGGTGCTACTGAAGCTGACATTCAGGAGTTGGAGAATGTATTAAAGGTGAAATTGCCACTTCCTTCAAGGATCCTTTATCGTTTTCACAATGGGCAAGAAATTGCAAAAGCAGATCCAGAAACTACTACATATGGCAGTTCTTTGGGTCTAATTGGTGGCTACTCCTTCTATAGTCATTTGGTGAATGTTTATCTATTACCTATACGTCAGATAATCCTAGAAACAAAGCAAACTAGGCGTCACTTGAGCTTTTTAAGAAGATCAAAGTATGTTCTCGTGGCTGCTTCATCCACATACAGTAGAAAGTTATTTTTCCTCAACTGTACCAATGGTCAACTATATGTTGGGACCAGGGATCTACTTACTGAAGGAGACATAATCCCTTGTGTACCTCATGATCTGATTAATTTACATCAGGAATTGAATATTTCAGAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTAGAACATGGCTTTATCAAACTTCATGACAAAGGAAATGGCAAAAGCATTAATCTTTTCCCAGAAGAACCCCCTCTTTGTTCAATGGCTGTTACTAATGGTGTGAAGGTTCGTGCTTCTGCATTGGTTATCCCTGAGTTGATTGATCTTCAAGATGACCTTGAAAAGTACTTATTTGCTTATTCAATCCGCTTGTCCCTTGAACCTCAAGGGTGCACTATTAATGGAATGTCCTTCAGCTCCTGCCAGCTCCATTGGAGGCACTGGATCATCCGAGCTAATGATATTGTTATATCTGATGTCAATGGAGAAGCTGTTATAGGACAGtatccacttttgcgtccaggtgctcaagaatttgtctatcagagtcgcatgcatctaccaacaccatcaggttccattgaaggttcttttacatttatacccggcagATTGGCAGACCCAAAAGGAGATCCTTTTCTAGCTACAGTGGCTCGTTTCCCGCTCCAGCTTCCAGACTATATTTTCTGA 1332 0.3904 MGLESVGDLAIHVILSKLGAQDTARVACVSKRFCSSASDDTLWINHCFHELALTQPLDHLGNPLSSFKECYQAWRGAFVMYPWSLVKRVKRCWDKIKTWLTNNFPEAEATLCKGATEADIQELENVLKVKLPLPSRILYRFHNGQEIAKADPETTTYGSSLGLIGGYSFYSHLVNVYLLPIRQIILETKQTRRHLSFLRRSKYVLVAASSTYSRKLFFLNCTNGQLYVGTRDLLTEGDIIPCVPHDLINLHQELNISEQQDAMLLWLEEHGRRLEHGFIKLHDKGNGKSINLFPEEPPLCSMAVTNGVKVRASALVIPELIDLQDDLEKYLFAYSIRLSLEPQGCTINGMSFSSCQLHWRHWIIRANDIVISDVNGEAVIGQYPLLRPGAQEFVYQSRMHLPTPSGSIEGSFTFIPGRLADPKGDPFLATVARFPLQLPDYIF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01156 443 Gene3D - 7 98 - -
Gma11g01156 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Gma11g01156 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Gma11g01156 443 SUPERFAMILY SMI1/KNR4-like 92 209 IPR037883 -
Gma11g01156 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Gma11g01156 443 Pfam ApaG domain 325 415 IPR007474 -
Gma11g01156 443 SUPERFAMILY F-box domain 11 72 IPR036047 GO:0005515
Gma11g01156 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Gma11g01156 443 Gene3D ApaG domain 300 443 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01156 Gma-Chr11 9743968 9747985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01156 K10290 - gmx:100778108 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01156 11 9743968 9747985 Gma11g01156 11 9743968 9747985 ECH
Gma12g00457 12 3745610 3749929 Gma11g01156 11 9743968 9747985 GST