Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00455 ATGGCAGTGGAAGACCGGTTCGCGAATTTGAACCCTAAGACGTGTGTGGTTTTAGGCGGCAGAGGATTCGTTGGAAGATCGTTGGTGCTGAGGCTGTTGAAACTCGGTAACTGGATCGTCCGAATCGCCGATTCCGCTCAGTCTCTCCAACTCCACCACTCCGAGTCTCTCCTCCAACAAGCTCTCTCTTCTTCTTCTCGCGCTTCTTACTTCCACGTCGACCTTCGCGATAAACGGAGCATTATCAAAGTTCTACAAGGTTCCTTTGTTGTCTTTTATTTGGATATTGCTGGCGTCGATGGGAATGACTTTTGTACTTGCTATAAGCTTATAGTTCAAGGTGCAAAGAATGTCATTAGTGTTTGCCGCGAATGTAGAGTGAAACGCCTGATATATAACAGTTCTGCTGATGTTGTATTTGATGGTTTGCATGATATTCGCGATGGAGATGAATCGTTGGCGTATCCGTGGAAAACTGACAACATGTTAAGTGACCTTAAGGCTCAAGCGGAAGCTTTGATCCTGAGTGCCAATGACATTGATGGCCTATTGACATGCTCTCTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACGGAATTTGTGCCATATTTTCTCAAATTAGCAAGATATGGTTTTTCAAAGTTTATCATAGGGACTGGTGATAATCTTTCAGATTTCACATTTTCTGAAAATGTTACTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAATGGTTTCTGCGGCTGGAAAGGCATTTTTCATCACAAATCTTGAGCCTATGAAATTCTGGGAATTTCTCTCGCTTTTGTTAGAAGGTCTTGAATATCAAAGGCCATTCATCAAACTTCCTGCTAAGTTGGTACAATATATTCTATCAGTTTTAAAGTGGGTACATAAAAAGTTGGGGCCCAGATACTTCAGTTATCCTTTATTAGTTCACTTTTTTCAGTTAGCTTCATACACCCGAACTTTCAACTGCATGGCAGCTCAGAATGATATTGGATACTCACCAATAGTCTCCCTTGAGGAAGGAGTCACATTAACCATAGAGTCATTCTCTCATTTAGCCAGAGACTCATCTTTTCCAAGATGCTGCAGTTTCACTGAACAGTCAAAAGCGGATAAGCTGCTGGGTGGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGAAATCCTTTGCATATTTCCTTGTGCTGGTTTTGTTGTTTTACTGGTCTTTCCTTTCTGGAAGAACTTTTATATCATCTGCTGCGAGACTTTTGCTGCTTGCCACATTACTTTTATATGGACATGGTTTTCTGCCATCAAAGTTATTTGGTTTTCACATACAAAGGATACCCACGTCTTATTTTGAGATCTCTGATACGGCAGTCAAAGATTCAGTTACCACTACAGTATATCTTTGGAACCGGGGTTTTCAAAATATAAGAGGACTGGCCCAAGGGGACAATTGGTCTGCATTTTTCAAGATTGCAGTTTTTCTTTACCTTCTGAAGTTGATCCTGTCAGAGTTGTTCACGAAAATGATAGGCATAGGTTTGGTGATCGCATTTATGGCATTTTTTGTTTACGAGCAATATGAATCCGAAATTGATGGATTGGTGGATTTTCTGTTCACCAGTTTGAAGGAGTTCATGATATATTTGATGAGAATTTCACCTGTTTCTATATTGCGGCTTCTGCATTATCACGACAATTTTCAGCGCTATGAAGGACCAAGAAAGAAACAGATTGATGGTTAA 1761 0.4083 MAVEDRFANLNPKTCVVLGGRGFVGRSLVLRLLKLGNWIVRIADSAQSLQLHHSESLLQQALSSSSRASYFHVDLRDKRSIIKVLQGSFVVFYLDIAGVDGNDFCTCYKLIVQGAKNVISVCRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTDNMLSDLKAQAEALILSANDIDGLLTCSLRPSNVFGPGDTEFVPYFLKLARYGFSKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQMVSAAGKAFFITNLEPMKFWEFLSLLLEGLEYQRPFIKLPAKLVQYILSVLKWVHKKLGPRYFSYPLLVHFFQLASYTRTFNCMAAQNDIGYSPIVSLEEGVTLTIESFSHLARDSSFPRCCSFTEQSKADKLLGGGKVADILLWRDEKKSFAYFLVLVLLFYWSFLSGRTFISSAARLLLLATLLLYGHGFLPSKLFGFHIQRIPTSYFEISDTAVKDSVTTTVYLWNRGFQNIRGLAQGDNWSAFFKIAVFLYLLKLILSELFTKMIGIGLVIAFMAFFVYEQYESEIDGLVDFLFTSLKEFMIYLMRISPVSILRLLHYHDNFQRYEGPRKKQIDG 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00455 586 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 11 492 - -
Gma12g00455 586 ProSiteProfiles Reticulon domain profile. 386 583 IPR003388 -
Gma12g00455 586 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 358 IPR036291 -
Gma12g00455 586 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 287 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gma12g00455 586 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 492 - -
Gma12g00455 586 Gene3D - 5 360 - -
Gma12g00455 586 Pfam Reticulon 386 542 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00455 Gma-Chr12 3723050 3730462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00455 13 363 Lipid Metabolism Gene Families AT2G33630 30.239 1.99e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00455 K23558 - gmx:100794808 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00455 12 3723050 3730462 Gma12g00455 12 3723050 3730462 ECH
Gma12g00455 12 3723050 3730462 Gma11g01154 11 9717402 9728308 GST