Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01154 ATGGGTGATACGAAGGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAGGGAAAGGTCTTCTATATGGATTTATGCGATTATTTTCAATACCATTAAAAACATTGCGTGGAGCTAGTCGGTCGCTGAGAGTAAATCAATTTTGCAGTGTAGTGAATCTATCGTCCTCATTGCAGATAGAATTGgttccatgccttagggacaattatgcatatcttttacacgatgtggatacggggacagttggtgttGTTGATCCTTCTGAAGCTGCACCTATCATAGATGCGTTGAGCAAGAAAGATTTAAATTTAACTTACATAATGAACACCAACCACCATCCTGATCATACTGGTGGAAATGCAGAGTTGAAAGAAAGGTATGGTGCAAAGGTAATTGGTTCAGAAATAGACAAGGAAAGAATCCCTGGTATTGATATCTATTTGAGTGATGGAGATAACTGGATGTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAGCAGGTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACACTTTGTTCAGCTTATCATGTGGCAAGCTCTTAGAAGGAACCCCCAAACAGATGTTATCTTCTCTTAAAAGGATCATGTCTTTGCCTGATGATACAAGTATTTACTGTGGTCATGAATATACATCGAGTAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAATCCTATGCTGCCCATGTAGCTAACCTTAGAAATAAGGGCTTGCCCACGATTCCAACTACGGTGAAAGTGGAAAAGGCTTGCAATCCATTTCTTCGCACATGGAGCATGGAAATCCGGCAAAAACTAAACATTGCAACCACAGCAGATGATGCAGAAGCCCTGGATTCCAAGAGGGGGTCCCCACCCACTCTCAGTGCGATTTGCATTGCATTCACAGTTTCCGCGCCAAAGGAAAAACGCAGAACAAGACGAACAACAGCGTTAACAATGGCGGTGGTGGACGATCGCTTCGCGGATTTGAACCCTAAGACGTGCGTGGTTTTAGGCGGCAGAGGATTCCTCGGAAGATCGTTGGTGCTCAGGCTGTTGAAACTCGGTAACTGGATCGTCCGAGTCGCCGATTCCGCTCAGTCTCTCCAACTCCACCACTCCGAGTCTCTCCTCGAACAAGCTCTCTCTTCTTCTCGCGCTTCTTACTTCCACGTCGACCTTCTCGATAAACGGAGCATTGTCAAAGTTCTAGAAGGTTCCTCTGTTGTCTTTTATATGGATGTTGCCGGCGTCGATGTGAATAACTTCTATACTTGCTATAAGCTTATGGTTCAAGGTGCAAAGAATGTCATTAGTGCTTGCCGGGAATGTAGAGTGAGACGCCTGATATATAACAGTTCGGCAGATGTTGTAGTTGGTGGTTTGCATGATATTCGTGATGGAGATGAGTCGTTGGCGTATCCGTGGAAAACTAACAACACGTTAAGTGACCTTAAGGCTCAAGCGGAAGCTTTGATCCTGAGTGCCAATGACATTGATGGCCTATTGACATGCTCTCTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACAGAATTTGTGCCATATTTTCTCAAATTAGCAAGATATGGTTTTTCAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGATTTCACCTTTTCTGAAAATGTTACTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACGGTTTCTGTGGCAGGAAAGACATTTTTCATCACAAATCTCGAGCCTATGAAATTCTGGGAATTTCTCTCACTTTTGTTAGAAGGTCTTGAATATCAAAGGCCATTCATCAAACTTCCTGCTAAGTTGGTGCAATATATTCTCTCAGTTTTAAAGTGGGTACATGAAAAGTTGGGATCCAGATACTTCAGTTATCCTTTATTAGTTCACTTTTTTCAGTTAGCTTCATACACCCGAACTTTCAACTGCATGGCAGCTCAGAAAGATATTGGATACTCACCAATAGTCTCCCTCGAGGAAGGAGTCACATTAACCATAGAATCATTCTCTCATTTAGCCAGAGACTCATCTTTTTCAAGATGCTGCAGTTCCACTGAACAGTCAAAAGCAGATAAGCTGCTGGGTGGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAGAAGAGAAGAAATCCTTTGCATGTTTCCTTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCTGGAAGAACTTTTATATCAGCTGCTGCGAGACTTTTGCTGTTTTCCACATTACTTTTATATGGACATGGTTTTCTGCCATCAAAGTTATTTGGTTTTCATATACAAAGGATACCCACGACGTATTTTGAGATCTCTGATACAGCAGTAAAAGATTCAGTTACCACTACAGTATATCTTTGGAACAGGGGTTTTCAAAATATAAGTGGCCTGGCCCAGGGGGACGATTGGTCTGCATTCTTCAAGATTGCAGTGTTTCTTTACCTTCTGAAGTTGATCCTGTCAGAGTTGTTCACGAAAATGATAGGCATAGGTTTGGCGGTCGCATTTATGGCATTTTTTGTTTACGAGCAATATGAATCCGAAATTGATGGATTGGTGGATTTTCTGTTCACCAGTTTGAAGGAGTTCATGATACATTTGATGAGAATCTCACCTGTTTCGATATCACGGCTTCTGCATTATCAGGAGAACTTTCAGCACTAG 2751 0.4115 MGDTKERSGFCVWPDARQLCLGKGLLYGFMRLFSIPLKTLRGASRSLRVNQFCSVVNLSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAAPIIDALSKKDLNLTYIMNTNHHPDHTGGNAELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEAGHVSFYFPGSGAIFTGDTLFSLSCGKLLEGTPKQMLSSLKRIMSLPDDTSIYCGHEYTSSNSKFALSIEPENKELQSYAAHVANLRNKGLPTIPTTVKVEKACNPFLRTWSMEIRQKLNIATTADDAEALDSKRGSPPTLSAICIAFTVSAPKEKRRTRRTTALTMAVVDDRFADLNPKTCVVLGGRGFLGRSLVLRLLKLGNWIVRVADSAQSLQLHHSESLLEQALSSSRASYFHVDLLDKRSIVKVLEGSSVVFYMDVAGVDVNNFYTCYKLMVQGAKNVISACRECRVRRLIYNSSADVVVGGLHDIRDGDESLAYPWKTNNTLSDLKAQAEALILSANDIDGLLTCSLRPSNVFGPGDTEFVPYFLKLARYGFSKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKTFFITNLEPMKFWEFLSLLLEGLEYQRPFIKLPAKLVQYILSVLKWVHEKLGSRYFSYPLLVHFFQLASYTRTFNCMAAQKDIGYSPIVSLEEGVTLTIESFSHLARDSSFSRCCSSTEQSKADKLLGGGKVADILLWREEKKSFACFLVLVLLFYWFFLSGRTFISAAARLLLFSTLLLYGHGFLPSKLFGFHIQRIPTTYFEISDTAVKDSVTTTVYLWNRGFQNISGLAQGDDWSAFFKIAVFLYLLKLILSELFTKMIGIGLAVAFMAFFVYEQYESEIDGLVDFLFTSLKEFMIHLMRISPVSISRLLHYQENFQH 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01154 916 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 358 628 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gma11g01154 916 Pfam Metallo-beta-lactamase superfamily 76 231 IPR001279 -
Gma11g01154 916 Pfam Reticulon 727 883 IPR003388 -
Gma11g01154 916 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 5 310 - -
Gma11g01154 916 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 65 306 IPR017782 GO:0004416|GO:0019243
Gma11g01154 916 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 351 699 IPR036291 -
Gma11g01154 916 Pfam Hydroxyacylglutathione hydrolase C-terminus 232 298 IPR032282 -
Gma11g01154 916 Gene3D - 348 701 - -
Gma11g01154 916 ProSiteProfiles Reticulon domain profile. 727 892 IPR003388 -
Gma11g01154 916 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 231 IPR035680 -
Gma11g01154 916 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 316 IPR017782 GO:0004416|GO:0019243
Gma11g01154 916 PANTHER BETA LACTAMASE DOMAIN 5 310 - -
Gma11g01154 916 Gene3D - 62 312 IPR036866 -
Gma11g01154 916 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 300 IPR036866 -
Gma11g01154 916 SMART Lactamase_B_5a 72 231 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01154 Gma-Chr11 9717402 9728308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01154 356 704 Lipid Metabolism Gene Families AT2G33630 29.067 8.02e-33 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01154 K23558 - gmx:100814147 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01154 11 9717402 9728308 Gma11g01154 11 9717402 9728308 ECH
Gma12g00455 12 3723050 3730462 Gma11g01154 11 9717402 9728308 GST